U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

cspE transcription antiterminator/RNA stability regulator CspE [ Serratia entomophila ]

Gene ID: 75023069, updated on 10-Oct-2024

Summary

Go to the top of the page Help
Gene symbol
cspE
Gene description
transcription antiterminator/RNA stability regulator CspE
Locus tag
KHA73_RS13975
Gene type
protein coding
Organism
Serratia entomophila (strain: A1, nat-host: Costelytra zealandica, culture-collection: DSM:12358, type-material: type strain of Serratia entomophila)
Lineage
Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Yersiniaceae; Serratia
Also known as
gicA; msmC
Old locus tag
KHA73_13970
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help

NZ_CP082787.1Genomic Context describing neighboring genes Neighboring gene 23S rRNA (guanine(745)-N(1))-methyltransferase Neighboring gene peptidoglycan editing factor PgeF Neighboring gene DUF2627 domain-containing protein Neighboring gene MBL fold metallo-hydrolase

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NZ_CP082787.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Specificity of DNA binding and dimerization by CspE from Escherichia coli. Johnston D, et al. J Biol Chem, 2006 Dec 29. PMID 17088256
  2. Escherichia coli poly(A)-binding proteins that interact with components of degradosomes or impede RNA decay mediated by polynucleotide phosphorylase and RNase E. Feng Y, et al. J Biol Chem, 2001 Aug 24. PMID 11390393
  3. Escherichia coli CspA-family RNA chaperones are transcription antiterminators. Bae W, et al. Proc Natl Acad Sci U S A, 2000 Jul 5. PMID 10884409, Free PMC Article
  4. Sequence-selective interactions with RNA by CspB, CspC and CspE, members of the CspA family of Escherichia coli. Phadtare S, et al. Mol Microbiol, 1999 Sep. PMID 10476034

GeneRIFs: Gene References Into Functions

General protein information

Go to the top of the page Help
Preferred Names
transcription antiterminator/RNA stability regulator CspE

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NZ_CP082787.1 Reference assembly

    Range
    2863335..2863544 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. WP_002221949.1 MULTISPECIES: transcription antiterminator/RNA stability regulator CspE [Enterobacterales]

    See identical proteins and their annotated locations for WP_002221949.1

    UniProtKB/TrEMBL
    A0A083ZYG9, A0A086FC80, A0A087KNK0, A0A0E1NRA3, A0A0F7HH21, A0A0H2W3V8, A0A0H2YIH0, A0A0H3B3W1, A0A0H3FEK3, A0A1C7WCI1, A0A1I4ZB54, A0A1S8CKG7, A0A1W5DLD3, A0A1X0WGB4, A0A209A410, A0A209A4K5, A0A250B6X5, A0A2G4U4P4, A0A2J9S8N7, A0A2L1UQD2, A0A2N0W2D4, A0A2N5ED61, A0A2N5EG23, A0A2N5ET66, A0A2R4NPA8, A0A2U1TS07, A0A2U1UT46, A0A318PEG7, A0A384KG43, A0A386HEV2, A0A3E2EJ91, A0A3G5L615, A0A419NBY5, A0A4P8SIX1, A0A4R7GIV6, A0A4S3LQP0, A0A4V2TNN7, A0A515CU42, A0A5P8YEJ4, A0A656VKV9, A0A6M2B5L9, A0A7G2JQJ3, A0A7S4LWQ7, A0A7U3Z2Z7, A0A7U5PGU4, A0A7W4F493, A0A848MIF4, A0A857EYZ8, A0A8B4GXL2, A0A9X3BKR0, A0A9X9C6L8, A0AA40X0K5, A0AA44CIL8, A0AA44YLS8, A0AA92X475, A0AAJ6HZE9, A0AAN0WQ94, A0AAN2TFA6, A0AAP9G0V4, A1JM53, A8GFN3, D4E568, F4MZ69, G7LMP0, H2IU31, I0QVS8, L0MJF7, Q66BZ2, Q74V47, S4YK55, W0LE52
    Conserved Domains (1) summary
    cl09927
    Location:1 → 69
    S1_like; Ribosomal protein S1-like RNA-binding domain. Found in a wide variety of RNA-associated proteins. Originally identified in S1 ribosomal protein. This superfamily also contains the Cold Shock Domain (CSD), which is a homolog of the S1 domain. Both domains ...