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cspD cold-shock protein CspD [ Bacillus amyloliquefaciens ]

Gene ID: 75095780, updated on 10-Oct-2024

Summary

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Gene symbol
cspD
Gene description
cold-shock protein CspD
Locus tag
J5X95_RS19670
Gene type
protein coding
Organism
Bacillus amyloliquefaciens (strain: GKT04, nat-host: Banana)
Lineage
Bacteria; Bacillota; Bacilli; Bacillales; Bacillaceae; Bacillus; Bacillus amyloliquefaciens group
Old locus tag
J5X95_19670
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Genomic context

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NZ_CP072120.1Genomic Context describing neighboring genes Neighboring gene diglucosyl diacylglycerol synthase Neighboring gene pseudo Neighboring gene hypothetical protein Neighboring gene DUF2564 family protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NZ_CP072120.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genome and transcriptome analysis of surfactin biosynthesis in Bacillus amyloliquefaciens MT45. Zhi Y, et al. Sci Rep, 2017 Jan 23. PMID 28112210, Free PMC Article
  2. The family of cold shock proteins of Bacillus subtilis. Stability and dynamics in vitro and in vivo. Schindler T, et al. J Biol Chem, 1999 Feb 5. PMID 9920884
  3. Cold shock stress-induced proteins in Bacillus subtilis. Graumann P, et al. J Bacteriol, 1996 Aug. PMID 8755892, Free PMC Article

GeneRIFs: Gene References Into Functions

General protein information

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Preferred Names
cold-shock protein CspD

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NZ_CP072120.1 Reference assembly

    Range
    3986301..3986501
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    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. WP_003153604.1 MULTISPECIES: cold-shock protein CspD [Bacillus]

    See identical proteins and their annotated locations for WP_003153604.1

    UniProtKB/TrEMBL
    A0A086X6J3, A0A0H3E0P7, A0A0J6EFZ0, A0A0J6EWD5, A0A0M0L484, A0A0M4FTA5, A0A150F9G8, A0A1D9PKH9, A0A1Y0XG90, A0A1Y0YTB8, A0A2M8T2Q4, A0A6H0WNV8, A0A6I7FDI1, A0A7G7UIL4, A0A7Y8RUN5, A0A837XXD8, A0A9P1JHR0, A0A9P2XTL5, A0A9Q4H9G3, A0A9Q4HTY7, A0A9Q6F280, A0A9W5LEK0, A0AAE2JX77, A0AAE2NUP3, A0AAI8MYG7, A0AAP3FZA9, A0AAP5V067, A0AAQ0A4B6, A7Z5U3, E0U0J0, G4NSH6, I2C6N9, M5PAB1, Q62TQ3, Q65IA2, T5HQZ4
    Conserved Domains (1) summary
    COG1278
    Location:1 → 66
    CspC; Cold shock protein, CspA family [Transcription]
Nucleotide Protein
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