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Tmem234 transmembrane protein 234 [ Mus musculus (house mouse) ]

Gene ID: 76799, updated on 2-Nov-2024

Summary

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Official Symbol
Tmem234provided by MGI
Official Full Name
transmembrane protein 234provided by MGI
Primary source
MGI:MGI:1924049
See related
Ensembl:ENSMUSG00000028797 AllianceGenome:MGI:1924049
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
1500002D11Rik; 2510006D16Rik; 4933407D05Rik
Summary
Predicted to be located in membrane. Orthologous to human TMEM234 (transmembrane protein 234). [provided by Alliance of Genome Resources, Nov 2024]
Expression
Ubiquitous expression in genital fat pad adult (RPKM 40.8), colon adult (RPKM 37.4) and 28 other tissues See more
Orthologs
human all
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Genomic context

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See Tmem234 in Genome Data Viewer
Location:
4 D2.2; 4 63.26 cM
Exon count:
7
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 4 NC_000070.7 (129494449..129502326)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 4 NC_000070.6 (129600669..129608533)

Chromosome 4 - NC_000070.7Genomic Context describing neighboring genes Neighboring gene family with sequence similarity 167, member B Neighboring gene STARR-positive B cell enhancer ABC_E11717 Neighboring gene eukaryotic translation initiation factor 3, subunit I Neighboring gene CapStarr-seq enhancer MGSCv37_chr4:129287304-129287568 Neighboring gene doublecortin domain containing 2b Neighboring gene STARR-positive B cell enhancer ABC_E10261 Neighboring gene IQ motif containing C Neighboring gene coiled coil domain containing 28B Neighboring gene STARR-seq mESC enhancer starr_11504 Neighboring gene predicted gene, 34305

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Mouse ENCODE transcriptome data Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

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Related articles in PubMed

  1. A mouse knockout library for secreted and transmembrane proteins. Tang T, et al. Nat Biotechnol, 2010 Jul. PMID 20562862
  2. A large-scale, gene-driven mutagenesis approach for the functional analysis of the mouse genome. Hansen J, et al. Proc Natl Acad Sci U S A, 2003 Aug 19. PMID 12904583, Free PMC Article
  3. BayGenomics: a resource of insertional mutations in mouse embryonic stem cells. Stryke D, et al. Nucleic Acids Res, 2003 Jan 1. PMID 12520002, Free PMC Article
  4. Libraries enriched for alternatively spliced exons reveal splicing patterns in melanocytes and melanomas. Watahiki A, et al. Nat Methods, 2004 Dec. PMID 15782199
  5. Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray. Tanaka TS, et al. Proc Natl Acad Sci U S A, 2000 Aug 1. PMID 10922068, Free PMC Article

See all (17) citations in PubMed

GeneRIFs: Gene References Into Functions

Variation

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Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)

General gene information

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Markers

Homology

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
  
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
  
located_in membrane IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
transmembrane protein 234

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001368255.1 → NP_001355184.1  transmembrane protein 234 isoform 3 precursor

    Status: VALIDATED

    Source sequence(s)
    AL671759
    UniProtKB/TrEMBL
    M0QWT3, Q9D484
    Related
    ENSMUSP00000137989.2, ENSMUST00000181579.8

  2. NM_001368256.1 → NP_001355185.1  transmembrane protein 234 isoform 2 precursor

    Status: VALIDATED

    Source sequence(s)
    AL671759
    UniProtKB/TrEMBL
    Q9D484

  3. NM_001368257.1 → NP_001355186.1  transmembrane protein 234 isoform 4 precursor

    Status: VALIDATED

    Source sequence(s)
    AL671759
    Consensus CDS
    CCDS89832.1
    UniProtKB/TrEMBL
    G3UZQ3, Q9D484
    Related
    ENSMUSP00000134588.2, ENSMUST00000173758.8

  4. NM_001368258.1 → NP_001355187.1  transmembrane protein 234 isoform 5

    Status: VALIDATED

    Source sequence(s)
    AL671759
    UniProtKB/TrEMBL
    Q9CY44
    Conserved Domains (1) summary
    pfam10639
    Location:14 → 87
    TMEM234; Putative transmembrane family 234

  5. NM_001368259.1 → NP_001355188.1  transmembrane protein 234 isoform 5

    Status: VALIDATED

    Source sequence(s)
    AL671759
    UniProtKB/TrEMBL
    Q9CY44
    Conserved Domains (1) summary
    pfam10639
    Location:14 → 87
    TMEM234; Putative transmembrane family 234

  6. NM_001368260.1 → NP_001355189.1  transmembrane protein 234 isoform 6

    Status: VALIDATED

    Source sequence(s)
    AL671759
    Conserved Domains (1) summary
    pfam10639
    Location:5 → 74
    TMEM234; Putative transmembrane family 234

  7. NM_029748.3 → NP_084024.1  transmembrane protein 234 isoform 1 precursor

    See identical proteins and their annotated locations for NP_084024.1

    Status: VALIDATED

    Source sequence(s)
    AL671759
    Consensus CDS
    CCDS18699.1
    UniProtKB/Swiss-Prot
    Q8R1E7
    UniProtKB/TrEMBL
    Q9D484
    Related
    ENSMUSP00000099651.4, ENSMUST00000102591.10
    Conserved Domains (1) summary
    pfam10639
    Location:18 → 126
    TMEM234; Putative transmembrane family 234

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000070.7 Reference GRCm39 C57BL/6J

    Range
    129494449..129502326
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_030253888.2 → XP_030109748.1  transmembrane protein 234 isoform X2

    Conserved Domains (1) summary
    pfam10639
    Location:5 → 74
    TMEM234; Putative transmembrane family 234

  2. XM_030253889.2 → XP_030109749.1  transmembrane protein 234 isoform X3

    Conserved Domains (1) summary
    pfam10639
    Location:1 → 68
    TMEM234; Putative transmembrane family 234

  3. XM_030253885.2 → XP_030109745.1  transmembrane protein 234 isoform X1

    UniProtKB/TrEMBL
    Q9CY44
    Conserved Domains (1) summary
    pfam10639
    Location:14 → 87
    TMEM234; Putative transmembrane family 234

  4. XM_030253884.2 → XP_030109744.1  transmembrane protein 234 isoform X1

    UniProtKB/TrEMBL
    Q9CY44
    Conserved Domains (1) summary
    pfam10639
    Location:14 → 87
    TMEM234; Putative transmembrane family 234

  5. XM_030253890.2 → XP_030109750.1  transmembrane protein 234 isoform X3

    Conserved Domains (1) summary
    pfam10639
    Location:1 → 68
    TMEM234; Putative transmembrane family 234

  6. XM_030253886.2 → XP_030109746.1  transmembrane protein 234 isoform X1

    UniProtKB/TrEMBL
    Q9CY44
    Conserved Domains (1) summary
    pfam10639
    Location:14 → 87
    TMEM234; Putative transmembrane family 234

  7. XM_030253887.1 → XP_030109747.1  transmembrane protein 234 isoform X1

    UniProtKB/TrEMBL
    Q9CY44
    Conserved Domains (1) summary
    pfam10639
    Location:14 → 87
    TMEM234; Putative transmembrane family 234

  8. XM_030253891.2 → XP_030109751.1  transmembrane protein 234 isoform X3

    Conserved Domains (1) summary
    pfam10639
    Location:1 → 68
    TMEM234; Putative transmembrane family 234
Nucleotide Protein Strain
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q8R1E7.1 GenPept UniProtKB/Swiss-Prot:Q8R1E7

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