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Bcl7a B cell CLL/lymphoma 7A [ Mus musculus (house mouse) ]

Gene ID: 77045, updated on 2-Nov-2024

Summary

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Official Symbol
Bcl7aprovided by MGI
Official Full Name
B cell CLL/lymphoma 7Aprovided by MGI
Primary source
MGI:MGI:1924295
See related
Ensembl:ENSMUSG00000029438 AllianceGenome:MGI:1924295
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
4432415N06Rik
Summary
Acts upstream of or within motor behavior and neuron projection arborization. Part of SWI/SNF complex. Is expressed in several structures, including central nervous system; foregut; sensory organ; tooth; and vibrissa. Orthologous to human BCL7A (BAF chromatin remodeling complex subunit BCL7A). [provided by Alliance of Genome Resources, Nov 2024]
Expression
Ubiquitous expression in CNS E14 (RPKM 21.1), CNS E11.5 (RPKM 20.9) and 26 other tissues See more
Orthologs
human all
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Genomic context

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See Bcl7a in Genome Data Viewer
Location:
5 F; 5 62.92 cM
Exon count:
6
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 5 NC_000071.7 (123482511..123512146)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 5 NC_000071.6 (123344448..123374083)

Chromosome 5 - NC_000071.7Genomic Context describing neighboring genes Neighboring gene STARR-positive B cell enhancer ABC_E9262 Neighboring gene proteasome (prosome, macropain) 26S subunit, non-ATPase, 9 Neighboring gene ribosomal protein L35A, pseudogene 6 Neighboring gene cilia and flagella associated protein 251 Neighboring gene STARR-positive B cell enhancer ABC_E10350 Neighboring gene CapStarr-seq enhancer MGSCv37_chr5:123794689-123794872 Neighboring gene predicted gene 15860 Neighboring gene STARR-seq mESC enhancer starr_14319 Neighboring gene STARR-seq mESC enhancer starr_14320 Neighboring gene predicted gene, 23458 Neighboring gene STARR-positive B cell enhancer ABC_E2764 Neighboring gene STARR-positive B cell enhancer ABC_E8080 Neighboring gene MLX interacting protein Neighboring gene STARR-positive B cell enhancer ABC_E3618 Neighboring gene ribosomal protein L31, pseudogene 6

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Mouse ENCODE transcriptome data Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

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Related articles in PubMed

  1. The SWI/SNF subunit Bcl7a contributes to motor coordination and Purkinje cell function. Wischhof L, et al. Sci Rep, 2017 Dec 6. PMID 29213114, Free PMC Article
  2. Proteomic and bioinformatic analysis of mammalian SWI/SNF complexes identifies extensive roles in human malignancy. Kadoch C, et al. Nat Genet, 2013 Jun. PMID 23644491, Free PMC Article
  3. A Human Hereditary Cardiomyopathy Shares a Genetic Substrate With Bicuspid Aortic Valve. Siguero-Álvarez M, et al. Circulation, 2023 Jan 3. PMID 36325906
  4. BCL7A-containing SWI/SNF/BAF complexes modulate mitochondrial bioenergetics during neural progenitor differentiation. Wischhof L, et al. EMBO J, 2022 Dec 1. PMID 36305367, Free PMC Article
  5. m(6)A epitranscriptomic modification regulates neural progenitor-to-glial cell transition in the retina. Xin Y, et al. Elife, 2022 Dec 2. PMID 36459087, Free PMC Article

See all (36) citations in PubMed

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. BCL7A-containing SWI/SNF/BAF complexes modulate mitochondrial bioenergetics during neural progenitor differentiation.
    Title: BCL7A-containing SWI/SNF/BAF complexes modulate mitochondrial bioenergetics during neural progenitor differentiation.
Submit: New GeneRIF Correction

Variation

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Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)

Pathways from PubChem

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Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Markers

Homology

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in chromatin remodeling NAS
Non-traceable Author Statement
more info
 PubMed 
acts_upstream_of_or_within embryo development IMP
Inferred from Mutant Phenotype
more info
 PubMed 
acts_upstream_of_or_within motor behavior IMP
Inferred from Mutant Phenotype
more info
 PubMed 
involved_in negative regulation of cell differentiation NAS
Non-traceable Author Statement
more info
 PubMed 
acts_upstream_of_or_within neuron projection arborization IMP
Inferred from Mutant Phenotype
more info
 PubMed 
involved_in positive regulation of cell population proliferation NAS
Non-traceable Author Statement
more info
 PubMed 
involved_in positive regulation of double-strand break repair NAS
Non-traceable Author Statement
more info
 PubMed 
involved_in positive regulation of stem cell population maintenance NAS
Non-traceable Author Statement
more info
 PubMed 
involved_in regulation of G0 to G1 transition NAS
Non-traceable Author Statement
more info
 PubMed 
involved_in regulation of G1/S transition of mitotic cell cycle NAS
Non-traceable Author Statement
more info
 PubMed 
involved_in regulation of mitotic metaphase/anaphase transition NAS
Non-traceable Author Statement
more info
 PubMed 
involved_in regulation of nucleotide-excision repair NAS
Non-traceable Author Statement
more info
 PubMed 
involved_in regulation of transcription by RNA polymerase II NAS
Non-traceable Author Statement
more info
 PubMed 
Component Evidence Code Pubs
part_of GBAF complex NAS
Non-traceable Author Statement
more info
 PubMed 
part_of SWI/SNF complex IDA
Inferred from Direct Assay
more info
 PubMed 
part_of SWI/SNF complex ISO
Inferred from Sequence Orthology
more info
  
part_of SWI/SNF complex NAS
Non-traceable Author Statement
more info
 PubMed 
located_in chromatin NAS
Non-traceable Author Statement
more info
 PubMed 
located_in nucleoplasm TAS
Traceable Author Statement
more info
  

General protein information

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Preferred Names
B-cell CLL/lymphoma 7 protein family member A

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_029850.3 → NP_084126.1  B-cell CLL/lymphoma 7 protein family member A

    See identical proteins and their annotated locations for NP_084126.1

    Status: VALIDATED

    Source sequence(s)
    AC113504, BC046777, BY271432
    Consensus CDS
    CCDS19661.1
    UniProtKB/Swiss-Prot
    Q8C361, Q8C8M8, Q8VD15, Q9CXE2
    Related
    ENSMUSP00000031391.3, ENSMUST00000031391.9
    Conserved Domains (1) summary
    pfam04714
    Location:4 → 50
    BCL_N; BCL7, N-terminal conserver region

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000071.7 Reference GRCm39 C57BL/6J

    Range
    123482511..123512146
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein Strain
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q9CXE2.1 GenPept UniProtKB/Swiss-Prot:Q9CXE2

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Chemical Information
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