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9430041J12Rik RIKEN cDNA 9430041J12 gene [ Mus musculus (house mouse) ]

Gene ID: 77323, updated on 17-Aug-2024

Summary

Official Symbol
9430041J12Rikprovided by MGI
Official Full Name
RIKEN cDNA 9430041J12 geneprovided by MGI
Primary source
MGI:MGI:1924573
See related
Ensembl:ENSMUSG00000086155 AllianceGenome:MGI:1924573
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Expression
Biased expression in cortex adult (RPKM 4.4), frontal lobe adult (RPKM 4.1) and 13 other tissues See more
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Genomic context

See 9430041J12Rik in Genome Data Viewer
Location:
7 A1; 7 2.35 cM
Exon count:
9
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 7 NC_000073.7 (4077124..4123727, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 7 NC_000073.6 (4074125..4120728, complement)

Chromosome 7 - NC_000073.7Genomic Context describing neighboring genes Neighboring gene STARR-seq mESC enhancer starr_17916 Neighboring gene predicted gene 15928 Neighboring gene leukocyte-associated Ig-like receptor 1 Neighboring gene STARR-seq mESC enhancer starr_17917 Neighboring gene predicted gene, 23741 Neighboring gene STARR-seq mESC enhancer starr_17919 Neighboring gene RIKEN cDNA D030047H15 gene Neighboring gene tweety family member 1 Neighboring gene leukocyte receptor cluster (LRC) member 8

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_033568.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AK082200
    Related
    ENSMUST00000154825.8

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000073.7 Reference GRCm39 C57BL/6J

    Range
    4077124..4123727 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)