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NQ541_RS11980 transposase [ [Ruminococcus] lactaris ATCC 29176 ]

Gene ID: 77335237, updated on 6-Feb-2024

Summary

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Gene symbol
NQ541_RS11980
Gene description
transposase
Locus tag
NQ541_RS11980
Gene type
protein coding
Organism
[Ruminococcus] lactaris ATCC 29176 (strain: ATCC 29176, nat-host: Homo sapiens, culture-collection: ATCC:29176, type-material: type strain of Ruminococcus lactaris)
Lineage
Bacteria; Bacillota; Clostridia; Lachnospirales; Lachnospiraceae; Mediterraneibacter
Old locus tag
NQ541_11980
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Genomic context

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NZ_CP102292.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene pseudo Neighboring gene IS3 family transposase Neighboring gene hypothetical protein Neighboring gene helix-turn-helix transcriptional regulator

Genomic regions, transcripts, and products

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Genomic Sequence:
NZ_CP102292.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genetic organization and transposition properties of IS511. Mullin DA, et al. Mol Gen Genet, 1997 Apr 28. PMID 9180700
  2. The use of an improved transposon mutagenesis system for DNA sequencing leads to the characterization of a new insertion sequence of Streptomyces lividans 66. Fischer J, et al. Gene, 1996 Nov 21. PMID 8973350
  3. Identification and nucleotide sequence of Rhizobium meliloti insertion sequence ISRm6, a small transposable element that belongs to the IS3 family. Zekrí S, et al. Gene, 1996 Oct 10. PMID 8917074
  4. Design, construction, and in vivo augmentation of a complex gut microbiome. Cheng AG, et al. Cell, 2022 Sep 15. PMID 36070752, Free PMC Article

GeneRIFs: Gene References Into Functions

General protein information

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Preferred Names
transposase

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NZ_CP102292.1 Reference assembly

    Range
    2567825..2568109
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    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. WP_023920455.1 MULTISPECIES: transposase [Lachnospiraceae]

    See identical proteins and their annotated locations for WP_023920455.1

    UniProtKB/TrEMBL
    V8C8V5
    Conserved Domains (1) summary
    NF033516
    Location:8 → 88
    transpos_IS3; IS3 family transposase