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yohP putative membrane protein YohP [ Escherichia coli str. K-12 substr. MG1655 ]

Gene ID: 7751636, updated on 19-Sep-2024

Summary

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Official Symbol
yohP
Official Full Name
putative membrane protein YohP
Primary source
ECOCYC:G0-10652
Locus tag
b4679
See related
ASAP:ABE-0285222
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
Lineage
Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
Also known as
ECK4494
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Genomic context

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Sequence:
NC_000913.3 (2228982..2229065)

NC_000913.3Genomic Context describing neighboring genes Neighboring gene putative oxidoreductase YohF Neighboring gene pseudo Neighboring gene tRNA-dihydrouridine(16) synthase Neighboring gene putative 3-hydroxypropanoate export protein YohJ Neighboring gene putative 3-hydroxypropanoate export protein YohK

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_000913.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Global approaches for finding small RNA and small open reading frame functions. Wassarman KM, et al. J Bacteriol, 2010 Jan. PMID 19854892, Free PMC Article
  2. Membranome: a database for proteome-wide analysis of single-pass membrane proteins. Lomize AL, et al. Nucleic Acids Res, 2017 Jan 4. PMID 27510400, Free PMC Article
  3. Small stress response proteins in Escherichia coli: proteins missed by classical proteomic studies. Hemm MR, et al. J Bacteriol, 2010 Jan. PMID 19734316, Free PMC Article
  4. Membrane localization of small proteins in Escherichia coli. Fontaine F, et al. J Biol Chem, 2011 Sep 16. PMID 21778229, Free PMC Article
  5. Small membrane proteins found by comparative genomics and ribosome binding site models. Hemm MR, et al. Mol Microbiol, 2008 Dec. PMID 19121005, Free PMC Article

See all (8) citations in PubMed

GeneRIFs: Gene References Into Functions

General gene information

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Gene Ontology Provided by EcoCyc

Component Evidence Code Pubs
located_in plasma membrane IDA
Inferred from Direct Assay
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
  
located_in plasma membrane RCA
inferred from Reviewed Computational Analysis
more info
 PubMed 

General protein information

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Preferred Names
putative membrane protein YohP

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000913.3 Reference assembly

    Range
    2228982..2229065
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. YP_002791249.1 putative membrane protein YohP [Escherichia coli str. K-12 substr. MG1655]

    See identical proteins and their annotated locations for YP_002791249.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    C1P609
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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