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0610025J13Rik RIKEN cDNA 0610025J13 gene [ Mus musculus (house mouse) ]

Gene ID: 78687, updated on 22-Oct-2024

Summary

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Official Symbol
0610025J13Rikprovided by MGI
Official Full Name
RIKEN cDNA 0610025J13 geneprovided by MGI
Primary source
MGI:MGI:1915618
See related
Ensembl:ENSMUSG00000046683 AllianceGenome:MGI:1915618
Gene type
ncRNA
RefSeq status
MODEL
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
B430316H17Rik
Expression
Low expression observed in reference dataset See more
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Genomic context

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See 0610025J13Rik in Genome Data Viewer
Location:
4 C6; 4 45.6 cM
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 4 NC_000070.7 (98209593..98220197)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 4 NC_000070.6 (98321356..98331960)

Chromosome 4 - NC_000070.7Genomic Context describing neighboring genes Neighboring gene predicted gene 12691 Neighboring gene ras homolog gene family, member G pseudogene Neighboring gene STARR-seq mESC enhancer starr_10844 Neighboring gene STARR-seq mESC enhancer starr_10845 Neighboring gene predicted gene 12787 Neighboring gene STARR-seq mESC enhancer starr_10846 Neighboring gene STARR-seq mESC enhancer starr_10847 Neighboring gene TM2 domain containing 1 Neighboring gene STARR-seq mESC enhancer starr_10849 Neighboring gene PATJ, crumbs cell polarity complex component Neighboring gene STARR-seq mESC enhancer starr_10850 Neighboring gene predicted gene, 40210

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Mouse ENCODE transcriptome data Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

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Related articles in PubMed

  1. The Vertebrate Genome Annotation browser 10 years on. Harrow JL, et al. Nucleic Acids Res, 2014 Jan. PMID 24316575, Free PMC Article
  2. A high-resolution anatomical atlas of the transcriptome in the mouse embryo. Diez-Roux G, et al. PLoS Biol, 2011 Jan 18. PMID 21267068, Free PMC Article
  3. Antisense transcription in the mammalian transcriptome. Katayama S, et al. Science, 2005 Sep 2. PMID 16141073
  4. High-efficiency full-length cDNA cloning. Carninci P, et al. Methods Enzymol, 1999. PMID 10349636
  5. RIKEN integrated sequence analysis (RISA) system--384-format sequencing pipeline with 384 multicapillary sequencer. Shibata K, et al. Genome Res, 2000 Nov. PMID 11076861, Free PMC Article

See all (9) citations in PubMed

GeneRIFs: Gene References Into Functions

General gene information

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Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
  
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
  

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000070.7 Reference GRCm39 C57BL/6J

    Range
    98209593..98220197
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_376450.3 RNA Sequence

  2. XR_376451.4 RNA Sequence

    Related
    ENSMUST00000268045.1
Nucleotide Protein Strain
Heading Accession and Version

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