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TGME49_247230 centrin [ Toxoplasma gondii ME49 ]

Gene ID: 7897983, updated on 17-May-2024

Summary

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Gene symbol
TGME49_247230
Gene description
centrin
Locus tag
TGME49_247230
See related
ToxoDB:TGME49_247230; VEuPathDB:TGME49_247230
Gene type
protein coding
RNA name
centrin
RefSeq status
PROVISIONAL
Organism
Toxoplasma gondii ME49 (strain: ME49)
Lineage
Eukaryota; Alveolata; Apicomplexa; Conoidasida; Coccidia; Eucoccidiorida; Eimeriorina; Sarcocystidae; Toxoplasma
Old locus tag
TGME49_047230
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Genomic context

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Location:
chromosome: XII
Exon count:
5
Sequence:
Chromosome: XII; NC_031480.1 (3180797..3184983)

Chromosome XII - NC_031480.1Genomic Context describing neighboring genes Neighboring gene microneme protein MIC15 Neighboring gene nudix -type motif 9 isoform a family protein Neighboring gene ubiquitin carboxyl-terminal hydrolase, family 1 protein Neighboring gene RbAp46

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_031480.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Conformational Plasticity of Centrin 1 from Toxoplasma gondii in Binding to the Centrosomal Protein SFI1. Bombardi L, et al. Biomolecules, 2022 Aug 13. PMID 36009009, Free PMC Article
  2. The interplay of self-assembly and target binding in centrin 1 from Toxoplasma gondii. Conter C, et al. Biochem J, 2021 Jul 16. PMID 34114596, Free PMC Article

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. Conformational Plasticity of Centrin 1 from Toxoplasma gondii in Binding to the Centrosomal Protein SFI1.
    Title: Conformational Plasticity of Centrin 1 from Toxoplasma gondii in Binding to the Centrosomal Protein SFI1.
  2. The interplay of self-assembly and target binding in centrin 1 from Toxoplasma gondii.
    Title: The interplay of self-assembly and target binding in centrin 1 from Toxoplasma gondii.
Submit: New GeneRIF Correction

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in centriole replication IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in mitotic cell cycle IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in centriole IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in centrosome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Names
centrin
XP_002367090.1
  • encoded by transcript TGME49_247230
    Product name based on PMID:16266757;11870220;18411248;11134072.

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_031480.1 Reference assembly

    Range
    3180797..3184983
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002367049.2 → XP_002367090.1  centrin [Toxoplasma gondii ME49]

    See identical proteins and their annotated locations for XP_002367090.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    A0A125YHX7
    UniProtKB/TrEMBL
    A0A086KQZ8, A0A086KUM3, A0A086LBG6, A0A086M6K9, A0A086QIE4, A0A086QU40, A0A0F7VAT1, A0A125YHX6, A0A139YA49, A0A151HG73, A0A2G8YBQ4, A0A2T6IZ28, A0A425I058, A0A7J6JUP3, B6KGW7, B9PPT2, B9QDJ3, S7WH37, S8ENL3
    Conserved Domains (1) summary
    PTZ00183
    Location:12 → 169
    PTZ00183; centrin; Provisional
Nucleotide Protein
Heading Accession and Version

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