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Duxf5 double homeobox family member 5 [ Mus musculus (house mouse) ]

Gene ID: 791309, updated on 27-Aug-2024

Summary

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Official Symbol
Duxf5provided by MGI
Official Full Name
double homeobox family member 5provided by MGI
Primary source
MGI:MGI:3641953
See related
AllianceGenome:MGI:3641953
Gene type
unknown
RefSeq status
MODEL
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Gm9919; Gm19459
Expression
Biased expression in testis adult (RPKM 1.6) and cortex adult (RPKM 0.0) See more

Genomic context

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See Duxf5 in Genome Data Viewer
Location:
10 B4; 10 29.3 cM
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 10 NC_000076.7 (58074856..58088524, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 10 NC_000076.6 (58239034..58252702, complement)

Chromosome 10 - NC_000076.7Genomic Context describing neighboring genes Neighboring gene double homeobox family member 3 Neighboring gene double homeobox family member 4 Neighboring gene STARR-positive B cell enhancer ABC_E2935 Neighboring gene GRIP and coiled-coil domain containing 2 Neighboring gene STARR-positive B cell enhancer ABC_E575 Neighboring gene LIM and senescent cell antigen-like domains 1 Neighboring gene STARR-seq mESC enhancer starr_26754 Neighboring gene predicted gene, 23058

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Mouse ENCODE transcriptome data Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

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Related articles in PubMed

  1. Dux-Mediated Corrections of Aberrant H3K9ac during 2-Cell Genome Activation Optimize Efficiency of Somatic Cell Nuclear Transfer. Yang G, et al. Cell Stem Cell, 2021 Jan 7. PMID 33049217
  2. Precise temporal regulation of Dux is important for embryo development. Guo M, et al. Cell Res, 2019 Nov. PMID 31591446, Free PMC Article
  3. Wnk1 kinase deficiency lowers blood pressure in mice: a gene-trap screen to identify potential targets for therapeutic intervention. Zambrowicz BP, et al. Proc Natl Acad Sci U S A, 2003 Nov 25. PMID 14610273, Free PMC Article
  4. Antisense transcription in the mammalian transcriptome. Katayama S, et al. Science, 2005 Sep 2. PMID 16141073
  5. High-efficiency full-length cDNA cloning. Carninci P, et al. Methods Enzymol, 1999. PMID 10349636

See all (10) citations in PubMed

GeneRIFs: Gene References Into Functions

Variation

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Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)

General gene information

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Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
  
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
  

NCBI Reference Sequences (RefSeq)

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NEW Try the new Transcript table

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000076.7 Reference GRCm39 C57BL/6J

    Range
    58074856..58088524 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_001783114.1 RNA Sequence

Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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