U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

PF3D7_1150000 rifin [ Plasmodium falciparum 3D7 ]

Gene ID: 811049, updated on 17-May-2024

Summary

Go to the top of the page Help
Gene symbol
PF3D7_1150000
Gene description
rifin
Locus tag
PF3D7_1150000
See related
PlasmoDB:PF3D7_1150000; VEuPathDB:PF3D7_1150000
Gene type
protein coding
RNA name
rifin
RefSeq status
PROVISIONAL
Organism
Plasmodium falciparum 3D7 (isolate: 3D7)
Lineage
Eukaryota; Sar; Alveolata; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania)
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See PF3D7_1150000 in Genome Data Viewer
Location:
chromosome: 11
Exon count:
2
Sequence:
Chromosome: 11; NC_037282.1 (2012989..2014316)

Chromosome 11 - NC_037282.1Genomic Context describing neighboring genes Neighboring gene rifin Neighboring gene stevor Neighboring gene pseudo Neighboring gene rifin

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_037282.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. RIFINs are adhesins implicated in severe Plasmodium falciparum malaria. Goel S, et al. Nat Med, 2015 Apr. PMID 25751816
  2. Rifins: a second family of clonally variant proteins expressed on the surface of red cells infected with Plasmodium falciparum. Kyes SA, et al. Proc Natl Acad Sci U S A, 1999 Aug 3. PMID 10430943, Free PMC Article
  3. Genome sequence of the human malaria parasite Plasmodium falciparum. Gardner MJ, et al. Nature, 2002 Oct 3. PMID 12368864, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Gene Ontology Provided by GeneDB

Process Evidence Code Pubs
acts_upstream_of_or_within adhesion of symbiont to microvasculature IDA
Inferred from Direct Assay
more info
 PubMed 
acts_upstream_of_or_within antigenic variation TAS
Traceable Author Statement
more info
 PubMed 
acts_upstream_of_or_within modulation by symbiont of host erythrocyte aggregation IDA
Inferred from Direct Assay
more info
 PubMed 
Component Evidence Code Pubs
located_in Maurer's cleft IDA
Inferred from Direct Assay
more info
 PubMed 
located_in host cell plasma membrane IDA
Inferred from Direct Assay
more info
 PubMed 
located_in symbiont-containing vacuole IDA
Inferred from Direct Assay
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
rifin

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_037282.1 Reference assembly

    Range
    2012989..2014316
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001348137.2 → XP_001348173.2  rifin [Plasmodium falciparum 3D7]

    See identical proteins and their annotated locations for XP_001348173.2

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    Q8IHM3, W7K4G5
    Conserved Domains (1) summary
    PTZ00046
    Location:1 → 369
    PTZ00046; rifin; Provisional
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases
Research Materials