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PF3D7_1205800 high mobility group protein B3, putative [ Plasmodium falciparum 3D7 ]

Gene ID: 811111, updated on 12-Sep-2024

Summary

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Gene symbol
PF3D7_1205800
Gene description
high mobility group protein B3, putative
Locus tag
PF3D7_1205800
See related
PlasmoDB:PF3D7_1205800; VEuPathDB:PF3D7_1205800
Gene type
protein coding
RNA name
high mobility group protein B3, putative
RefSeq status
PROVISIONAL
Organism
Plasmodium falciparum 3D7 (isolate: 3D7)
Lineage
Eukaryota; Sar; Alveolata; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania)
Orthologs
all
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Genomic context

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See PF3D7_1205800 in Genome Data Viewer
Location:
chromosome: 12
Exon count:
4
Sequence:
Chromosome: 12; NC_037284.1 (256367..263731)

Chromosome 12 - NC_037284.1Genomic Context describing neighboring genes Neighboring gene tetratricopeptide repeat protein, putative Neighboring gene targeted glyoxalase II Neighboring gene conserved protein, unknown function Neighboring gene shewanella-like protein phosphatase 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_037284.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Organellar proteomics reveals hundreds of novel nuclear proteins in the malaria parasite Plasmodium falciparum. Oehring SC, et al. Genome Biol, 2012 Nov 26. PMID 23181666, Free PMC Article
  2. A protein interaction network of the malaria parasite Plasmodium falciparum. LaCount DJ, et al. Nature, 2005 Nov 3. PMID 16267556
  3. Genome sequence of the human malaria parasite Plasmodium falciparum. Gardner MJ, et al. Nature, 2002 Oct 3. PMID 12368864, Free PMC Article

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by GeneDB

Component Evidence Code Pubs
located_in nucleus HDA PubMed 

General protein information

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Preferred Names
high mobility group protein B3, putative

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_037284.1 Reference assembly

    Range
    256367..263731
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001350431.1 → XP_001350467.1  high mobility group protein B3, putative [Plasmodium falciparum 3D7]

    See identical proteins and their annotated locations for XP_001350467.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A0L7KGM2, A0A2I0BYI3, Q8I5Y7
    Conserved Domains (2) summary
    cd00084
    Location:826 → 885
    HMG-box; High Mobility Group (HMG)-box is found in a variety of eukaryotic chromosomal proteins and transcription factors. HMGs bind to the minor groove of DNA and have been classified by DNA binding preferences. Two phylogenically distinct groups of Class I ...
    pfam15963
    Location:2135 → 2215
    Myb_DNA-bind_7; Myb DNA-binding like
Nucleotide Protein
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