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PF3D7_0904800 replication protein A1, small fragment [ Plasmodium falciparum 3D7 ]

Gene ID: 813327, updated on 12-Sep-2024

Summary

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Gene symbol
PF3D7_0904800
Gene description
replication protein A1, small fragment
Locus tag
PF3D7_0904800
See related
PlasmoDB:PF3D7_0904800; VEuPathDB:PF3D7_0904800
Gene type
protein coding
RNA name
replication protein A1, small fragment
RefSeq status
PROVISIONAL
Organism
Plasmodium falciparum 3D7 (isolate: 3D7)
Lineage
Eukaryota; Sar; Alveolata; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania)
Orthologs
all
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Genomic context

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See PF3D7_0904800 in Genome Data Viewer
Location:
chromosome: 9
Exon count:
2
Sequence:
Chromosome: 9; NC_004330.2 (222271..224156)

Chromosome 9 - NC_004330.2Genomic Context describing neighboring genes Neighboring gene ubiquitin specific protease, putative Neighboring gene bacterial histone-like protein Neighboring gene copper-transporting ATPase Neighboring gene conserved Plasmodium protein, unknown function

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_004330.2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Opposing roles for two molecular forms of replication protein A in Rad51-Rad54-mediated DNA recombination in Plasmodium falciparum. Gopalakrishnan AM, et al. mBio, 2013 Apr 30. PMID 23631919, Free PMC Article
  2. Functional Characterization of the m(6)A-Dependent Translational Modulator PfYTH.2 in the Human Malaria Parasite. Sinha A, et al. mBio, 2021 Apr 27. PMID 33906926, Free PMC Article
  3. Organellar proteomics reveals hundreds of novel nuclear proteins in the malaria parasite Plasmodium falciparum. Oehring SC, et al. Genome Biol, 2012 Nov 26. PMID 23181666, Free PMC Article
  4. Sequence of Plasmodium falciparum chromosomes 1, 3-9 and 13. Hall N, et al. Nature, 2002 Oct 3. PMID 12368867

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by GeneDB

Function Evidence Code Pubs
enables RNA binding HDA PubMed 
Component Evidence Code Pubs
located_in nucleus HDA PubMed 

General protein information

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Preferred Names
replication protein A1, small fragment

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_004330.2 Reference assembly

    Range
    222271..224156
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001351886.1 → XP_001351922.1  replication protein A1, small fragment [Plasmodium falciparum 3D7]

    See identical proteins and their annotated locations for XP_001351922.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A024V5Y1, A0A024W8B5, A0A024WRM1, A0A024X8M0, A0A0L1I3V8, A0A0L7K4V0, A0A0L7LWQ8, Q8I3A1, W4IHR1, W4J5N2, W7FQV0, W7JPD6, W7KG26
    Conserved Domains (1) summary
    TIGR00617
    Location:10 → 455
    rpa1; replication factor-a protein 1 (rpa1)
Nucleotide Protein
Heading Accession and Version

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