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[ Arabidopsis thaliana (thale cress) ]

Gene ID: 814649, updated on 22-Aug-2024

Summary

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Primary source
Araport:AT2G01210
Locus tag
AT2G01210
See related
TAIR:AT2G01210
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
F10A8.9; F10A8_9
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Genomic context

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Location:
chromosome: 2
Exon count:
2
Sequence:
Chromosome: 2; NC_003071.7 (119270..121980, complement)

Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene phosphatidic acid phosphatase 1 Neighboring gene Octicosapeptide/Phox/Bem1p family protein Neighboring gene indole-3-acetic acid inducible 32 Neighboring gene ncRNA Neighboring gene Nucleotidylyl transferase superfamily protein Neighboring gene reticulon-like protein B15

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003071.7

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Two Arabidopsis Receptor-like Cytoplasmic Kinases SZE1 and SZE2 Associate with the ZAR1-ZED1 Complex and Are Required for Effector-Triggered Immunity. Liu C, et al. Mol Plant, 2019 Jul 1. PMID 30947022
  2. The Arabidopsis Receptor Kinase ZAR1 Is Required for Zygote Asymmetric Division and Its Daughter Cell Fate. Yu TY, et al. PLoS Genet, 2016 Mar. PMID 27014878, Free PMC Article
  3. A brassinosteroid-signaling kinase interacts with multiple receptor-like kinases in Arabidopsis. Xu P, et al. Mol Plant, 2014 Feb. PMID 24051702, Free PMC Article
  4. Identification of new intrinsic proteins in Arabidopsis plasma membrane proteome. Marmagne A, et al. Mol Cell Proteomics, 2004 Jul. PMID 15060130
  5. A membrane protein/signaling protein interaction network for Arabidopsis version AMPv2. Lalonde S, et al. Front Physiol, 2010. PMID 21423366, Free PMC Article

See all (13) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

NM_126182.4

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
  
enables kinase activity IDA
Inferred from Direct Assay
more info
 PubMed 
enables kinase activity ISS
Inferred from Sequence or Structural Similarity
more info
  
enables protein binding IPI
Inferred from Physical Interaction
more info
 PubMed 
enables protein serine/threonine kinase activity IMP
Inferred from Mutant Phenotype
more info
 PubMed 
Process Evidence Code Pubs
acts_upstream_of_or_within protein autophosphorylation IDA
Inferred from Direct Assay
more info
 PubMed 
involved_in protein autophosphorylation IMP
Inferred from Mutant Phenotype
more info
 PubMed 
involved_in zygote asymmetric cell division IMP
Inferred from Mutant Phenotype
more info
 PubMed 
acts_upstream_of_or_within zygote asymmetric cytokinesis in embryo sac IMP
Inferred from Mutant Phenotype
more info
 PubMed 
Component Evidence Code Pubs
located_in chloroplast HDA PubMed 
located_in chloroplast stroma HDA PubMed 
located_in extracellular region ISM
Inferred from Sequence Model
more info
  
located_in plant-type cell wall HDA PubMed 
located_in plasma membrane HDA PubMed 
located_in plasma membrane IDA
Inferred from Direct Assay
more info
 PubMed 
located_in pollen tube IDA
Inferred from Direct Assay
more info
 PubMed 
located_in secretory vesicle HDA PubMed 

General protein information

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Preferred Names
Leucine-rich repeat protein kinase family protein
NP_178230.1
  • Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: chloroplast stroma, chloroplast, plasma membrane, plant-type cell wall; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT1G25320.1); Has 133812 Blast hits to 98087 proteins in 4104 species: Archae - 103; Bacteria - 11207; Metazoa - 34549; Fungi - 6957; Plants - 66297; Viruses - 188; Other Eukaryotes - 14511 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003071.7 Reference assembly

    Range
    119270..121980 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_126182.4 → NP_178230.1  Leucine-rich repeat protein kinase family protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_178230.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q9ZU46
    UniProtKB/TrEMBL
    A0A178VVZ3, A0A5S9WW85
    Conserved Domains (4) summary
    PLN00113
    Location:60 → 709
    PLN00113; leucine-rich repeat receptor-like protein kinase; Provisional
    cd14066
    Location:410 → 711
    STKc_IRAK; Catalytic domain of the Serine/Threonine kinases, Interleukin-1 Receptor Associated Kinases and related STKs
    sd00033
    Location:64 → 89
    LRR_RI; leucine-rich repeat [structural motif]
    pfam08263
    Location:21 → 61
    LRRNT_2; Leucine rich repeat N-terminal domain
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q9ZU46.1

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