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Nucleotidylyl transferase superfamily protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 814650, updated on 18-Sep-2024

Summary

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Official Full Name
Nucleotidylyl transferase superfamily protein
Primary source
TAIR:AT2G01220
Locus tag
AT2G01220
See related
Araport:AT2G01220
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
AT2G01230; F10A8.10; F10A8_10
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Genomic context

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Location:
chromosome: 2
Exon count:
12
Sequence:
Chromosome: 2; NC_003071.7 (123023..126611)

Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene Octicosapeptide/Phox/Bem1p family protein Neighboring gene indole-3-acetic acid inducible 32 Neighboring gene Leucine-rich repeat protein kinase family protein Neighboring gene ncRNA Neighboring gene reticulon-like protein B15 Neighboring gene Ribosomal protein L30/L7 family protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003071.7

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Proteomic study of the Arabidopsis thaliana chloroplastic envelope membrane utilizing alternatives to traditional two-dimensional electrophoresis. Froehlich JE, et al. J Proteome Res, 2003 Jul-Aug. PMID 12938931
  2. Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana. Lin X, et al. Nature, 1999 Dec 16. PMID 10617197

GeneRIFs: Gene References Into Functions

General gene information

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Homology

NM_126183.2
NM_179589.4

Gene Ontology Provided by TAIR

Process Evidence Code Pubs
involved_in biosynthetic process IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in chloroplast envelope HDA PubMed 

General protein information

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Preferred Names
Nucleotidylyl transferase superfamily protein
NP_178231.2
  • Nucleotidylyl transferase superfamily protein; FUNCTIONS IN: nucleotidyltransferase activity; INVOLVED IN: biosynthetic process; LOCATED IN: chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Cytidylyltransferase (InterPro:IPR004820); BEST Arabidopsis thaliana protein match is: Nucleotidylyl transferase superfamily protein (TAIR:AT3G27610.2); Has 432 Blast hits to 425 proteins in 57 species: Archae - 6; Bacteria - 30; Metazoa - 0; Fungi - 7; Plants - 78; Viruses - 0; Other Eukaryotes - 311 (source: NCBI BLink).
NP_849920.1
  • Nucleotidylyl transferase superfamily protein; FUNCTIONS IN: nucleotidyltransferase activity; INVOLVED IN: biosynthetic process; LOCATED IN: chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Cytidylyltransferase (InterPro:IPR004820); BEST Arabidopsis thaliana protein match is: Nucleotidylyl transferase superfamily protein (TAIR:AT3G27610.1); Has 429 Blast hits to 422 proteins in 57 species: Archae - 6; Bacteria - 30; Metazoa - 0; Fungi - 7; Plants - 76; Viruses - 0; Other Eukaryotes - 310 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003071.7 Reference assembly

    Range
    123023..126611
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_179589.4 → NP_849920.1  Nucleotidylyl transferase superfamily protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_849920.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178VYM8, A0A7G2E4M1, Q8GX51, Q8L845
    Conserved Domains (1) summary
    cl00015
    Location:217 → 382
    nt_trans; nucleotidyl transferase superfamily

  2. NM_126183.2 → NP_178231.2  Nucleotidylyl transferase superfamily protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_178231.2

    Status: REVIEWED

    UniProtKB/TrEMBL
    F4IM97, Q8LFF6
    Conserved Domains (2) summary
    cl00015
    Location:216 → 381
    nt_trans; nucleotidyl transferase superfamily
    cl00666
    Location:25 → 102
    CinA; Competence-damaged protein
Nucleotide Protein
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