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STL2P SEC12P-like 2 protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 814675, updated on 18-Sep-2024

Summary

Official Symbol
STL2P
Official Full Name
SEC12P-like 2 protein
Primary source
TAIR:AT2G01470
Locus tag
AT2G01470
See related
Araport:AT2G01470
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
ATSEC12; F2I9.9; F2I9_9; SEC12P-like 2 protein
Summary
Sec12p-like protein (GTP exchange protein) that functionally complements yeast sec12 null mutant. Protein is localized to the ER.
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Genomic context

See STL2P in Genome Data Viewer
Location:
chromosome: 2
Exon count:
10
Sequence:
Chromosome: 2; NC_003071.7 (211913..214473, complement)

Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene DEAD/DEAH box RNA helicase family protein Neighboring gene ncRNA Neighboring gene MAP kinase 17 Neighboring gene P-loop containing nucleoside triphosphate hydrolases superfamily protein Neighboring gene O-fucosyltransferase family protein Neighboring gene phytanoyl-CoA dioxygenase (PhyH) family protein

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General protein information

Preferred Names
SEC12P-like 2 protein
NP_178256.1
  • SEC12P-like 2 protein (STL2P); FUNCTIONS IN: nucleotide binding; INVOLVED IN: ER to Golgi vesicle-mediated transport; LOCATED IN: integral to endoplasmic reticulum membrane, endoplasmic reticulum, plasma membrane, membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40 repeat (InterPro:IPR001680), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT5G50550.1); Has 6374 Blast hits to 3814 proteins in 364 species: Archae - 22; Bacteria - 2789; Metazoa - 1016; Fungi - 1422; Plants - 400; Viruses - 0; Other Eukaryotes - 725 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003071.7 Reference assembly

    Range
    211913..214473 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_126208.4NP_178256.1  SEC12P-like 2 protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_178256.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q39221, Q7EP29, Q8VZ72
    UniProtKB/TrEMBL
    A0A178VVH6, A0A7G2E6R6
    Conserved Domains (3) summary
    COG2319
    Location:77354
    WD40; WD40 repeat [General function prediction only]
    sd00039
    Location:158193
    7WD40; WD40 repeat [structural motif]
    cl02567
    Location:116354
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...