ARM repeat superfamily protein [Arabidopsis thaliana (thale cress)] - Gene

Summary

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Official Full Name: ARM repeat superfamily protein
Primary source: TAIR:AT2G05810
Locus tag: AT2G05810
See related: Araport:AT2G05810
Gene type: protein coding
RefSeq status: REVIEWED
Organism: Arabidopsis thaliana (ecotype: Columbia)
Lineage: Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as: T17C22.4; T17C22_4
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Genomic context

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See in Genome Data Viewer

Location:: chromosome: 2

Exon count:: 2

Sequence:: Chromosome: 2; NC_003071.7 (2213960..2217159, complement)

Chromosome 2 - NC_003071.7 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Go to reference sequence details

Genomic Sequence:: NC_003071.7

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

data suggest that LFR is a novel nuclear-localized ARM-repeat protein that functions in leaf and flower development in Arabidopsis
Title: LFR, which encodes a novel nuclear-localized Armadillo-repeat protein, affects multiple developmental processes in the aerial organs in Arabidopsis.

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General gene information

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NM_126594.4

Supported by ESTs:

NM_179608.1

Supported by ESTs:

Gene Ontology Provided by TAIR

Function	Evidence Code	Pubs
enables molecular_function	ND No biological Data available more info

Component	Evidence Code	Pubs
located_in chloroplast	ISM Inferred from Sequence Model more info

General protein information

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Preferred Names: ARM repeat superfamily protein

NP_178638.1

ARM repeat superfamily protein; FUNCTIONS IN: binding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Armadillo-like helical (InterPro:IPR011989), Armadillo (InterPro:IPR000225), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT2G45720.2); Has 3013 Blast hits to 2075 proteins in 241 species: Archae - 0; Bacteria - 0; Metazoa - 567; Fungi - 298; Plants - 1810; Viruses - 0; Other Eukaryotes - 338 (source: NCBI BLink).

NP_849939.1

ARM repeat superfamily protein; FUNCTIONS IN: binding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Armadillo-like helical (InterPro:IPR011989), Armadillo (InterPro:IPR000225), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT2G45720.2); Has 3013 Blast hits to 2075 proteins in 241 species: Archae - 0; Bacteria - 0; Metazoa - 567; Fungi - 298; Plants - 1810; Viruses - 0; Other Eukaryotes - 338 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

NC_003071.7 Reference assembly

Range

2213960..2217159 complement

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GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

NM_126594.4 → NP_178638.1 ARM repeat superfamily protein [Arabidopsis thaliana]

See identical proteins and their annotated locations for NP_178638.1

Status: REVIEWED

UniProtKB/TrEMBL

A0A654ETQ3, Q8S8G1

Conserved Domains (3) summary

cd00020
Location:322 → 440

ARM; Armadillo/beta-catenin-like repeats. An approximately 40 amino acid long tandemly repeated sequence motif first identified in the Drosophila segment polarity gene armadillo; these repeats were also found in the mammalian armadillo homolog beta-catenin, ...

sd00043
Location:280 → 312

ARM; armadillo repeat [structural motif]

cl22454
Location:197 → 355

ARM; Armadillo/beta-catenin-like repeats. An approximately 40 amino acid long tandemly repeated sequence motif first identified in the Drosophila segment polarity gene armadillo; these repeats were also found in the mammalian armadillo homolog beta-catenin, ...
NM_179608.1 → NP_849939.1 ARM repeat superfamily protein [Arabidopsis thaliana]

See identical proteins and their annotated locations for NP_849939.1

Status: REVIEWED

UniProtKB/TrEMBL

A0A654ETQ3, Q8S8G1

Conserved Domains (3) summary

cd00020
Location:322 → 440

ARM; Armadillo/beta-catenin-like repeats. An approximately 40 amino acid long tandemly repeated sequence motif first identified in the Drosophila segment polarity gene armadillo; these repeats were also found in the mammalian armadillo homolog beta-catenin, ...

sd00043
Location:280 → 312

ARM; armadillo repeat [structural motif]

cl22454
Location:197 → 355

ARM; Armadillo/beta-catenin-like repeats. An approximately 40 amino acid long tandemly repeated sequence motif first identified in the Drosophila segment polarity gene armadillo; these repeats were also found in the mammalian armadillo homolog beta-catenin, ...