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Msn moesin [ Rattus norvegicus (Norway rat) ]

Gene ID: 81521, updated on 2-Nov-2024

Summary

Official Symbol
Msnprovided by RGD
Official Full Name
moesinprovided by RGD
Primary source
RGD:621260
See related
EnsemblRapid:ENSRNOG00000030118 AllianceGenome:RGD:621260
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Rattus norvegicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Summary
Enables actin binding activity. Predicted to be involved in several processes, including cellular response to testosterone stimulus; epithelial cell differentiation; and positive regulation of macromolecule metabolic process. Predicted to act upstream of or within positive regulation of podosome assembly. Located in several cellular components, including T-tubule; cytoplasmic side of plasma membrane; and filopodium membrane. Human ortholog(s) of this gene implicated in immunodeficiency 50. Orthologous to human MSN (moesin). [provided by Alliance of Genome Resources, Nov 2024]
Expression
Biased expression in Lung (RPKM 2179.2), Spleen (RPKM 1235.3) and 7 other tissues See more
Orthologs
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Genomic context

See Msn in Genome Data Viewer
Location:
Xq22
Exon count:
13
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCr8 (GCF_036323735.1) X NC_086039.1 (65005546..65073512)
RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) X NC_051356.1 (60996043..61064011)
106 previous assembly Rnor_6.0 (GCF_000001895.5) X NC_005120.4 (65226834..65294192)

Chromosome X - NC_086039.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC102550969 Neighboring gene LAS1-like, ribosome biogenesis factor Neighboring gene small Cajal body-specific RNA 3 Neighboring gene uncharacterized LOC120099372 Neighboring gene microRNA 223 Neighboring gene V-set and immunoglobulin domain containing 4 Neighboring gene hephaestin

Genomic regions, transcripts, and products

Expression

  • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
  • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
  • BioProject: PRJNA238328
  • Publication: PMID 24510058
  • Analysis date: Mon Jun 6 17:44:12 2016

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Pathways from PubChem

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Gene Ontology Provided by RGD

Function Evidence Code Pubs
enables actin binding IBA
Inferred from Biological aspect of Ancestor
more info
 
enables actin binding IDA
Inferred from Direct Assay
more info
PubMed 
enables actin binding IEA
Inferred from Electronic Annotation
more info
 
enables cell adhesion molecule binding IBA
Inferred from Biological aspect of Ancestor
more info
 
enables cell adhesion molecule binding IEA
Inferred from Electronic Annotation
more info
 
enables cell adhesion molecule binding ISO
Inferred from Sequence Orthology
more info
 
enables double-stranded RNA binding IEA
Inferred from Electronic Annotation
more info
 
enables double-stranded RNA binding ISO
Inferred from Sequence Orthology
more info
 
enables enzyme binding ISO
Inferred from Sequence Orthology
more info
 
enables protein kinase binding IEA
Inferred from Electronic Annotation
more info
 
enables protein kinase binding ISO
Inferred from Sequence Orthology
more info
 
enables protein-macromolecule adaptor activity TAS
Traceable Author Statement
more info
PubMed 
enables signaling receptor binding IEA
Inferred from Electronic Annotation
more info
 
enables signaling receptor binding ISO
Inferred from Sequence Orthology
more info
 
Process Evidence Code Pubs
involved_in T cell aggregation IEA
Inferred from Electronic Annotation
more info
 
involved_in T cell aggregation ISO
Inferred from Sequence Orthology
more info
 
involved_in T cell aggregation ISS
Inferred from Sequence or Structural Similarity
more info
 
involved_in T cell migration IEA
Inferred from Electronic Annotation
more info
 
involved_in T cell migration ISO
Inferred from Sequence Orthology
more info
 
involved_in T cell migration ISS
Inferred from Sequence or Structural Similarity
more info
 
involved_in T cell proliferation IEA
Inferred from Electronic Annotation
more info
 
involved_in T cell proliferation ISO
Inferred from Sequence Orthology
more info
 
involved_in T cell proliferation ISS
Inferred from Sequence or Structural Similarity
more info
 
involved_in cellular response to testosterone stimulus IEA
Inferred from Electronic Annotation
more info
 
involved_in cellular response to testosterone stimulus ISO
Inferred from Sequence Orthology
more info
 
involved_in establishment of endothelial barrier IEA
Inferred from Electronic Annotation
more info
 
involved_in establishment of endothelial barrier ISO
Inferred from Sequence Orthology
more info
 
involved_in establishment of epithelial cell apical/basal polarity IEA
Inferred from Electronic Annotation
more info
 
involved_in establishment of epithelial cell apical/basal polarity ISO
Inferred from Sequence Orthology
more info
 
involved_in gland morphogenesis IEA
Inferred from Electronic Annotation
more info
 
involved_in gland morphogenesis ISO
Inferred from Sequence Orthology
more info
 
involved_in immunological synapse formation IEA
Inferred from Electronic Annotation
more info
 
involved_in immunological synapse formation ISO
Inferred from Sequence Orthology
more info
 
involved_in immunological synapse formation ISS
Inferred from Sequence or Structural Similarity
more info
 
involved_in leukocyte cell-cell adhesion ISO
Inferred from Sequence Orthology
more info
 
involved_in leukocyte migration ISO
Inferred from Sequence Orthology
more info
 
involved_in membrane to membrane docking IEA
Inferred from Electronic Annotation
more info
 
involved_in membrane to membrane docking ISO
Inferred from Sequence Orthology
more info
 
involved_in positive regulation of early endosome to late endosome transport IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in positive regulation of early endosome to late endosome transport IEA
Inferred from Electronic Annotation
more info
 
involved_in positive regulation of early endosome to late endosome transport ISO
Inferred from Sequence Orthology
more info
 
involved_in positive regulation of gene expression IEA
Inferred from Electronic Annotation
more info
 
involved_in positive regulation of gene expression ISO
Inferred from Sequence Orthology
more info
 
involved_in positive regulation of podosome assembly IEA
Inferred from Electronic Annotation
more info
 
acts_upstream_of_or_within positive regulation of podosome assembly ISO
Inferred from Sequence Orthology
more info
 
involved_in positive regulation of protein catabolic process IEA
Inferred from Electronic Annotation
more info
 
involved_in positive regulation of protein catabolic process ISO
Inferred from Sequence Orthology
more info
 
involved_in positive regulation of protein localization to early endosome IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in positive regulation of protein localization to early endosome IEA
Inferred from Electronic Annotation
more info
 
involved_in positive regulation of protein localization to early endosome ISO
Inferred from Sequence Orthology
more info
 
involved_in regulation of cell shape IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in regulation of cell shape IEA
Inferred from Electronic Annotation
more info
 
involved_in regulation of cell shape ISO
Inferred from Sequence Orthology
more info
 
involved_in regulation of cell size IEA
Inferred from Electronic Annotation
more info
 
NOT involved_in regulation of cell size ISO
Inferred from Sequence Orthology
more info
 
involved_in regulation of cell size ISO
Inferred from Sequence Orthology
more info
 
involved_in regulation of lymphocyte migration IEA
Inferred from Electronic Annotation
more info
 
involved_in regulation of lymphocyte migration ISO
Inferred from Sequence Orthology
more info
 
involved_in regulation of organelle assembly IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in regulation of organelle assembly ISO
Inferred from Sequence Orthology
more info
 
Component Evidence Code Pubs
located_in T-tubule IDA
Inferred from Direct Assay
more info
PubMed 
is_active_in adherens junction IBA
Inferred from Biological aspect of Ancestor
more info
 
is_active_in apical part of cell IBA
Inferred from Biological aspect of Ancestor
more info
 
located_in apical part of cell ISO
Inferred from Sequence Orthology
more info
 
located_in apical plasma membrane IEA
Inferred from Electronic Annotation
more info
 
located_in apical plasma membrane ISO
Inferred from Sequence Orthology
more info
 
located_in basolateral plasma membrane IEA
Inferred from Electronic Annotation
more info
 
located_in basolateral plasma membrane ISO
Inferred from Sequence Orthology
more info
 
located_in cell periphery ISO
Inferred from Sequence Orthology
more info
 
located_in cell surface IDA
Inferred from Direct Assay
more info
PubMed 
located_in cell surface IEA
Inferred from Electronic Annotation
more info
 
located_in cell surface ISO
Inferred from Sequence Orthology
more info
 
located_in cell tip IDA
Inferred from Direct Assay
more info
PubMed 
located_in cytoplasmic side of plasma membrane IDA
Inferred from Direct Assay
more info
PubMed 
located_in cytoskeleton IEA
Inferred from Electronic Annotation
more info
 
is_active_in filopodium IBA
Inferred from Biological aspect of Ancestor
more info
 
located_in filopodium IEA
Inferred from Electronic Annotation
more info
 
located_in filopodium ISO
Inferred from Sequence Orthology
more info
 
located_in filopodium membrane IDA
Inferred from Direct Assay
more info
PubMed 
located_in focal adhesion IEA
Inferred from Electronic Annotation
more info
 
located_in focal adhesion ISO
Inferred from Sequence Orthology
more info
 
is_active_in microvillus IBA
Inferred from Biological aspect of Ancestor
more info
 
located_in microvillus ISO
Inferred from Sequence Orthology
more info
 
located_in microvillus ISS
Inferred from Sequence or Structural Similarity
more info
 
located_in microvillus membrane IEA
Inferred from Electronic Annotation
more info
 
located_in perinuclear region of cytoplasm IEA
Inferred from Electronic Annotation
more info
 
located_in perinuclear region of cytoplasm ISO
Inferred from Sequence Orthology
more info
 
is_active_in plasma membrane IBA
Inferred from Biological aspect of Ancestor
more info
 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 
located_in plasma membrane ISO
Inferred from Sequence Orthology
more info
 
located_in pseudopodium IEA
Inferred from Electronic Annotation
more info
 
located_in pseudopodium ISO
Inferred from Sequence Orthology
more info
 
located_in uropod IEA
Inferred from Electronic Annotation
more info
 
located_in uropod ISO
Inferred from Sequence Orthology
more info
 

General protein information

Preferred Names
moesin
Names
membrane-organizing extension spike protein

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_030863.2NP_110490.2  moesin

    Status: PROVISIONAL

    Source sequence(s)
    JAXUCZ010000021
    UniProtKB/Swiss-Prot
    O35763
    UniProtKB/TrEMBL
    A6IQ37
    Related
    ENSRNOP00000068359.3, ENSRNOT00000076181.3
    Conserved Domains (3) summary
    smart00295
    Location:7206
    B41; Band 4.1 homologues
    cd13194
    Location:200296
    FERM_C_ERM; FERM domain C-lobe/F3 of the ERM family
    pfam00769
    Location:347577
    ERM; Ezrin/radixin/moesin family

RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCr8

Genomic

  1. NC_086039.1 Reference GRCr8

    Range
    65005546..65073512
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)