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Translocon-associated protein (TRAP), alpha subunit [ Arabidopsis thaliana (thale cress) ]

Gene ID: 816160, updated on 18-Sep-2024

Summary

Official Full Name
Translocon-associated protein (TRAP), alpha subunit
Primary source
TAIR:AT2G16595
Locus tag
AT2G16595
See related
Araport:AT2G16595
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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Genomic context

Location:
chromosome: 2
Exon count:
8
Sequence:
Chromosome: 2; NC_003071.7 (7198127..7200385)

Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein Neighboring gene rotamase CYP 3 Neighboring gene pseudo

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

NM_127211.4

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
 
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
 
Component Evidence Code Pubs
located_in chloroplast ISM
Inferred from Sequence Model
more info
 
located_in endoplasmic reticulum HDA PubMed 

General protein information

Preferred Names
Translocon-associated protein (TRAP), alpha subunit
NP_179250.2
  • Translocon-associated protein (TRAP), alpha subunit; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, endoplasmic reticulum; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Translocon-associated protein (TRAP), alpha subunit (InterPro:IPR005595); BEST Arabidopsis thaliana protein match is: Translocon-associated protein (TRAP), alpha subunit (TAIR:AT2G21160.1); Has 245 Blast hits to 245 proteins in 98 species: Archae - 0; Bacteria - 0; Metazoa - 135; Fungi - 29; Plants - 60; Viruses - 0; Other Eukaryotes - 21 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003071.7 Reference assembly

    Range
    7198127..7200385
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_127211.4NP_179250.2  Translocon-associated protein (TRAP), alpha subunit [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_179250.2

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178VWV9, Q6AWS7
    Conserved Domains (1) summary
    pfam03896
    Location:28235
    TRAP_alpha; Translocon-associated protein (TRAP), alpha subunit