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SCPL12 serine carboxypeptidase-like 12 [ Arabidopsis thaliana (thale cress) ]

Gene ID: 816823, updated on 18-Sep-2024

Summary

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Official Symbol
SCPL12
Official Full Name
serine carboxypeptidase-like 12
Primary source
TAIR:AT2G22920
Locus tag
AT2G22920
See related
Araport:AT2G22920
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
serine carboxypeptidase-like 12; T20K9.13; T20K9_13
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Genomic context

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See SCPL12 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
15
Sequence:
Chromosome: 2; NC_003071.7 (9753631..9757600)

Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene N-acetyl-l-glutamate synthase 1 Neighboring gene UDP-Glycosyltransferase superfamily protein Neighboring gene uncharacterized protein Neighboring gene Defensin-like (DEFL) family protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003071.7

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana. Lin X, et al. Nature, 1999 Dec 16. PMID 10617197

GeneRIFs: Gene References Into Functions

Pathways from PubChem

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General gene information

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Markers

NM_001202652.1
NM_001335827.1
NM_127857.5
NM_179702.1

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables serine-type carboxypeptidase activity IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
involved_in proteolysis IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in extracellular region ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
serine carboxypeptidase-like 12
NP_001189581.1
  • serine carboxypeptidase-like 12 (SCPL12); FUNCTIONS IN: serine-type carboxypeptidase activity; INVOLVED IN: proteolysis; EXPRESSED IN: inflorescence meristem, hypocotyl, root, flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Peptidase S10, serine carboxypeptidase (InterPro:IPR001563); BEST Arabidopsis thaliana protein match is: serine carboxypeptidase-like 11 (TAIR:AT2G22970.1).
NP_179876.1
  • serine carboxypeptidase-like 12 (SCPL12); FUNCTIONS IN: serine-type carboxypeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: plant-type cell wall; EXPRESSED IN: stem, inflorescence meristem, hypocotyl, root, flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Peptidase S10, serine carboxypeptidase (InterPro:IPR001563); BEST Arabidopsis thaliana protein match is: serine carboxypeptidase-like 11 (TAIR:AT2G22970.1); Has 4008 Blast hits to 3906 proteins in 455 species: Archae - 0; Bacteria - 499; Metazoa - 649; Fungi - 844; Plants - 1574; Viruses - 0; Other Eukaryotes - 442 (source: NCBI BLink).
NP_850033.1
  • serine carboxypeptidase-like 12 (SCPL12); FUNCTIONS IN: serine-type carboxypeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: plant-type cell wall; EXPRESSED IN: stem, inflorescence meristem, hypocotyl, root, flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Peptidase S10, serine carboxypeptidase (InterPro:IPR001563); BEST Arabidopsis thaliana protein match is: serine carboxypeptidase-like 11 (TAIR:AT2G22970.3); Has 3940 Blast hits to 3855 proteins in 454 species: Archae - 0; Bacteria - 499; Metazoa - 627; Fungi - 829; Plants - 1550; Viruses - 0; Other Eukaryotes - 435 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003071.7 Reference assembly

    Range
    9753631..9757600
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001202652.1 → NP_001189581.1  serine carboxypeptidase-like 12 [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_001189581.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    F4IKI5
    Conserved Domains (1) summary
    cl08270
    Location:1 → 256
    Peptidase_S10; Serine carboxypeptidase

  2. NM_127857.5 → NP_179876.1  serine carboxypeptidase-like 12 [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_179876.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    O81009, Q3EBW1
    UniProtKB/TrEMBL
    A0A178VR71, A0A5S9X0N5
    Conserved Domains (1) summary
    cl08270
    Location:13 → 435
    Peptidase_S10; Serine carboxypeptidase

  3. NM_001335827.1 → NP_001325019.1  serine carboxypeptidase-like 12 [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A1P8B1W3

  4. NM_179702.1 → NP_850033.1  serine carboxypeptidase-like 12 [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_850033.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A7G2EB37
    Conserved Domains (1) summary
    cl08270
    Location:13 → 395
    Peptidase_S10; Serine carboxypeptidase
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
O81009.1

Gene LinkOut

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