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Stress responsive alpha-beta barrel domain protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 817811, updated on 18-Sep-2024

Summary

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Official Full Name
Stress responsive alpha-beta barrel domain protein
Primary source
TAIR:AT2G32500
Locus tag
AT2G32500
See related
Araport:AT2G32500
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
T26B15.6; T26B15_6
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Genomic context

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Location:
chromosome: 2
Exon count:
9
Sequence:
Chromosome: 2; NC_003071.7 (13795244..13797237, complement)

Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene miscRNA Neighboring gene mitogen-activated protein kinase kinase kinase 17 Neighboring gene alpha/beta-Hydrolases superfamily protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003071.7

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana. Lin X, et al. Nature, 1999 Dec 16. PMID 10617197

GeneRIFs: Gene References Into Functions

General gene information

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Homology

NM_001336399.1

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
  
Component Evidence Code Pubs
located_in chloroplast ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
Stress responsive alpha-beta barrel domain protein
NP_001318337.1
  • Stress responsive alpha-beta barrel domain protein; CONTAINS InterPro DOMAIN/s: Stress responsive alpha-beta barrel (InterPro:IPR013097), Dimeric alpha-beta barrel (InterPro:IPR011008); BEST Arabidopsis thaliana protein match is: Stress responsive alpha-beta barrel domain protein (TAIR:AT2G31670.1); Has 68 Blast hits to 66 proteins in 17 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 0; Plants - 61; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003071.7 Reference assembly

    Range
    13795244..13797237 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_128809.6 → NP_180809.2  Stress responsive alpha-beta barrel domain protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_180809.2

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A5S9X393, A0A654EY67, Q67XD6
    Conserved Domains (2) summary
    smart00886
    Location:57 → 151
    Dabb; Stress responsive A/B Barrel Domain
    cl10022
    Location:175 → 266
    ABM; Antibiotic biosynthesis monooxygenase

  2. NM_001336399.1 → NP_001318337.1  Stress responsive alpha-beta barrel domain protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    F4ITR8, O80887
Nucleotide Protein
Heading Accession and Version

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