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YUC7 YUCCA 7 [ Arabidopsis thaliana (thale cress) ]

Gene ID: 817885, updated on 18-Sep-2024

Summary

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Official Symbol
YUC7
Official Full Name
YUCCA 7
Primary source
TAIR:AT2G33230
Locus tag
AT2G33230
See related
Araport:AT2G33230
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
F25I18.3; F25I18_3; YUCCA 7
Summary
Encodes a flavin monooxygenase gene which belongs to the tryptophan-dependent auxin biosynthetic pathway and enhances drought resistance.
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Genomic context

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See YUC7 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
3
Sequence:
Chromosome: 2; NC_003071.7 (14080319..14081971, complement)

Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene Serinc-domain containing serine and sphingolipid biosynthesis protein Neighboring gene heat shock protein 60-2 Neighboring gene GRIM-19 protein Neighboring gene low-molecular-weight cysteine-rich 49 Neighboring gene myosin XI D

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003071.7

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Activation of a flavin monooxygenase gene YUCCA7 enhances drought resistance in Arabidopsis. Lee M, et al. Planta, 2012 May. PMID 22109847
  2. Endogenous auxin maintains embryonic cell identity and promotes somatic embryo development in Arabidopsis. Karami O, et al. Plant J, 2023 Jan. PMID 36345646, Free PMC Article
  3. Activation-tagged suppressors of a weak brassinosteroid receptor mutant. Kang B, et al. Mol Plant, 2010 Jan. PMID 19995721, Free PMC Article
  4. Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana. Lin X, et al. Nature, 1999 Dec 16. PMID 10617197

GeneRIFs: Gene References Into Functions

General gene information

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Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables N,N-dimethylaniline monooxygenase activity IEA
Inferred from Electronic Annotation
more info
  
enables NADP binding IEA
Inferred from Electronic Annotation
more info
  
enables flavin adenine dinucleotide binding IEA
Inferred from Electronic Annotation
more info
  
enables indole-3-pyruvate monooxygenase activity IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
acts_upstream_of_or_within indoleacetic acid biosynthetic process IMP
Inferred from Mutant Phenotype
more info
 PubMed 
acts_upstream_of_or_within response to water deprivation IMP
Inferred from Mutant Phenotype
more info
 PubMed 
acts_upstream_of_or_within somatic embryogenesis IEP
Inferred from Expression Pattern
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
YUCCA 7
NP_180881.1
  • YUCCA 7 (YUC7); FUNCTIONS IN: NADP or NADPH binding, oxidoreductase activity, monooxygenase activity, FAD binding, flavin-containing monooxygenase activity; INVOLVED IN: oxidation reduction; CONTAINS InterPro DOMAIN/s: Pyridine nucleotide-disulphide oxidoreductase, class-II (InterPro:IPR000103), FAD-dependent pyridine nucleotide-disulphide oxidoreductase (InterPro:IPR013027), Flavin-containing monooxygenase-like (InterPro:IPR020946); BEST Arabidopsis thaliana protein match is: YUCCA 3 (TAIR:AT1G04610.1); Has 9342 Blast hits to 9320 proteins in 1117 species: Archae - 14; Bacteria - 4686; Metazoa - 781; Fungi - 1476; Plants - 662; Viruses - 0; Other Eukaryotes - 1723 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003071.7 Reference assembly

    Range
    14080319..14081971 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_128882.2 → NP_180881.1  YUCCA 7 [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_180881.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    O49312
    UniProtKB/TrEMBL
    A0A178VZZ0
    Conserved Domains (2) summary
    COG2072
    Location:33 → 410
    CzcO; Predicted flavoprotein CzcO associated with the cation diffusion facilitator CzcD [Inorganic ion transport and metabolism]
    pfam13738
    Location:33 → 232
    Pyr_redox_3; Pyridine nucleotide-disulphide oxidoreductase
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
O49312.1

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