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RPL24A ribosomal protein L24 [ Arabidopsis thaliana (thale cress) ]

Gene ID: 818234, updated on 18-Sep-2024

Summary

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Official Symbol
RPL24A
Official Full Name
ribosomal protein L24
Primary source
TAIR:AT2G36620
Locus tag
AT2G36620
See related
Araport:AT2G36620
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
F13K3.2; F13K3_2; ribosomal protein L24
Summary
RPL24A encodes ribosomal protein L24, homolog of cytosolic RPL24, found in archaea and higher eukaryotes. Arabidopsis has two RPL24 homologs, RPL24A (AT2G36620) and RPL24B (AT3G53020).
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Genomic context

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See RPL24A in Genome Data Viewer
Location:
chromosome: 2
Exon count:
5
Sequence:
Chromosome: 2; NC_003071.7 (15350268..15352013, complement)

Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene proline transporter 3 Neighboring gene ncRNA Neighboring gene tRNA-Arg Neighboring gene homeobox protein 22 Neighboring gene Sulfite exporter TauE/SafE family protein Neighboring gene embryonic cell protein 63

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003071.7

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Loss of Ribosomal Protein L24A (RPL24A) suppresses proline accumulation of Arabidopsis thaliana ring zinc finger 1 (atrzf1) mutant in response to osmotic stress. Park SH, et al. Biochem Biophys Res Commun, 2017 Dec 16. PMID 29066352
  2. A new plant protein interacts with eIF3 and 60S to enhance virus-activated translation re-initiation. Thiébeauld O, et al. EMBO J, 2009 Oct 21. PMID 19745810, Free PMC Article
  3. Late ribosomal protein localization in Arabidopsis thaliana differs to that in Saccharomyces cerevisiae. Palm D, et al. FEBS Open Bio, 2018 Sep. PMID 30186745, Free PMC Article
  4. REIL proteins of Arabidopsis thaliana interact in yeast-2-hybrid assays with homologs of the yeast Rlp24, Rpl24A, Rlp24B, Arx1, and Jjj1 proteins. Schmidt S, et al. Plant Signal Behav, 2014. PMID 24603461, Free PMC Article
  5. The REIL1 and REIL2 proteins of Arabidopsis thaliana are required for leaf growth in the cold. Schmidt S, et al. Plant Physiol, 2013 Dec. PMID 24038679, Free PMC Article

See all (13) citations in PubMed

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. These results suggest that pca21 acts as partial suppressor of atrzf1 in the osmotic stress response through the Pro-mediated pathway.
    Title: Loss of Ribosomal Protein L24A (RPL24A) suppresses proline accumulation of Arabidopsis thaliana ring zinc finger 1 (atrzf1) mutant in response to osmotic stress.
Submit: New GeneRIF Correction

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

NM_129217.5

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables mRNA binding IDA
Inferred from Direct Assay
more info
 PubMed 
enables protein binding IPI
Inferred from Physical Interaction
more info
 PubMed 
Component Evidence Code Pubs
colocalizes_with cytoplasm IDA
Inferred from Direct Assay
more info
 PubMed 
located_in cytoplasm ISM
Inferred from Sequence Model
more info
  
part_of cytosolic large ribosomal subunit HDA PubMed 
located_in endoplasmic reticulum HDA PubMed 
colocalizes_with nucleolus IDA
Inferred from Direct Assay
more info
 PubMed 
colocalizes_with nucleus IDA
Inferred from Direct Assay
more info
 PubMed 

General protein information

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Preferred Names
ribosomal protein L24
NP_565851.1
  • ribosomal protein L24 (RPL24A); FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: ribosome, cytosolic large ribosomal subunit, plasma membrane, chloroplast, membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L24e (InterPro:IPR000988); BEST Arabidopsis thaliana protein match is: Ribosomal protein L24e family protein (TAIR:AT3G53020.1); Has 1480 Blast hits to 1465 proteins in 352 species: Archae - 106; Bacteria - 37; Metazoa - 463; Fungi - 306; Plants - 338; Viruses - 0; Other Eukaryotes - 230 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003071.7 Reference assembly

    Range
    15350268..15352013 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_129217.5 → NP_565851.1  ribosomal protein L24 [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_565851.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q42347, Q9LF73, Q9SKP1
    UniProtKB/TrEMBL
    A0A178V7Q9, A0A178W0L3, A0A5S9X4K0
    Conserved Domains (1) summary
    pfam01246
    Location:4 → 64
    Ribosomal_L24e; Ribosomal protein L24e
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q42347.2

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