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PLP6 PATATIN-like protein 6 [ Arabidopsis thaliana (thale cress) ]

Gene ID: 818507, updated on 18-Sep-2024

Summary

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Official Symbol
PLP6
Official Full Name
PATATIN-like protein 6
Primary source
TAIR:AT2G39220
Locus tag
AT2G39220
See related
Araport:AT2G39220
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
PATATIN-like protein 6; PLA IIB; T16B24.14; T16B24_14
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Genomic context

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See PLP6 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
2
Sequence:
Chromosome: 2; NC_003071.7 (16374881..16377168, complement)

Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene Protein kinase superfamily protein Neighboring gene Seven transmembrane MLO family protein Neighboring gene Major facilitator superfamily protein Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene LATERAL ORGAN JUNCTION

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003071.7

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Phospholipase pPLAIIIα Increases Germination Rate and Resistance to Turnip Crinkle Virus when Overexpressed. Jang JH, et al. Plant Physiol, 2020 Nov. PMID 32859754, Free PMC Article
  2. Extensive signal integration by the phytohormone protein network. Altmann M, et al. Nature, 2020 Jul. PMID 32612234
  3. Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana. Lin X, et al. Nature, 1999 Dec 16. PMID 10617197

GeneRIFs: Gene References Into Functions

Pathways from PubChem

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Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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NM_129480.3

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables hydrolase activity IDA
Inferred from Direct Assay
more info
 PubMed 
enables lipase activity IDA
Inferred from Direct Assay
more info
 PubMed 
enables phospholipase activity IDA
Inferred from Direct Assay
more info
 PubMed 
enables protein binding IPI
Inferred from Physical Interaction
more info
 PubMed 
Component Evidence Code Pubs
located_in plasma membrane IDA
Inferred from Direct Assay
more info
 PubMed 

General protein information

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Preferred Names
PATATIN-like protein 6
NP_181455.1
  • PATATIN-like protein 6 (PLP6); FUNCTIONS IN: nutrient reservoir activity; INVOLVED IN: metabolic process, lipid metabolic process; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Acyl transferase/acyl hydrolase/lysophospholipase (InterPro:IPR016035), Patatin (InterPro:IPR002641); BEST Arabidopsis thaliana protein match is: patatin-like protein 6 (TAIR:AT3G54950.1); Has 1294 Blast hits to 1292 proteins in 232 species: Archae - 0; Bacteria - 327; Metazoa - 139; Fungi - 43; Plants - 635; Viruses - 0; Other Eukaryotes - 150 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003071.7 Reference assembly

    Range
    16374881..16377168 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_129480.3 → NP_181455.1  PATATIN-like protein 6 [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_181455.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    O80959
    UniProtKB/TrEMBL
    A0A178VZQ4, A0A5S9X5H2
    Conserved Domains (1) summary
    cd07199
    Location:110 → 431
    Pat17_PNPLA8_PNPLA9_like; Patatin-like phospholipase; includes PNPLA8, PNPLA9, and Pat17
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
O80959.1

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