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Putative membrane lipoprotein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 818541, updated on 18-Sep-2024

Summary

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Official Full Name
Putative membrane lipoprotein
Primary source
TAIR:AT2G39560
Locus tag
AT2G39560
See related
Araport:AT2G39560
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
F12L6.22; F12L6_22
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Genomic context

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Location:
chromosome: 2
Exon count:
1
Sequence:
Chromosome: 2; NC_003071.7 (16504838..16506150, complement)

Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene Gibberellin-regulated family protein Neighboring gene Prenyltransferase family protein Neighboring gene ACT domain-containing protein Neighboring gene zinc finger C3H1 domain protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003071.7

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana. Lin X, et al. Nature, 1999 Dec 16. PMID 10617197

GeneRIFs: Gene References Into Functions

General gene information

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NM_129514.3

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
  

General protein information

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Preferred Names
Putative membrane lipoprotein
NP_181488.1
  • Putative membrane lipoprotein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: C globular stage, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G59350.1); Has 60 Blast hits to 60 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 60; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003071.7 Reference assembly

    Range
    16504838..16506150 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_129514.3 → NP_181488.1  Putative membrane lipoprotein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_181488.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178VTE0, A0A5S9X5L2, A0A654F0A9, O80643
Nucleotide Protein
Heading Accession and Version

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