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late embryogenesis abundant protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 818799, updated on 18-Sep-2024

Summary

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Official Full Name
late embryogenesis abundant protein
Primary source
TAIR:AT2G41990
Locus tag
AT2G41990
See related
Araport:AT2G41990
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
T6D20.12; T6D20_12
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Genomic context

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Location:
chromosome: 2
Exon count:
2
Sequence:
Chromosome: 2; NC_003071.7 (17527167..17528937)

Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene Protein kinase superfamily protein Neighboring gene Protein with RING/U-box and TRAF-like domain Neighboring gene plant EC metallothionein family protein Neighboring gene Transmembrane amino acid transporter family protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003071.7

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana. Lin X, et al. Nature, 1999 Dec 16. PMID 10617197

GeneRIFs: Gene References Into Functions

General gene information

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Homology

NM_129763.4

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
  

General protein information

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Preferred Names
late embryogenesis abundant protein
NP_181730.1
  • CONTAINS InterPro DOMAIN/s: Late embryogenesis abundant protein, group 2 (InterPro:IPR004864); BEST Arabidopsis thaliana protein match is: Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family (TAIR:AT4G35170.1); Has 172 Blast hits to 168 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 172; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003071.7 Reference assembly

    Range
    17527167..17528937
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_129763.4 → NP_181730.1  late embryogenesis abundant protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_181730.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178VUL1, A0A7G2EDH9, P93747
Nucleotide Protein
Heading Accession and Version

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