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Carbohydrate-binding X8 domain superfamily protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 818894, updated on 18-Sep-2024

Summary

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Official Full Name
Carbohydrate-binding X8 domain superfamily protein
Primary source
TAIR:AT2G42930
Locus tag
AT2G42930
See related
Araport:AT2G42930
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
F23E6.9; F23E6_9
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Genomic context

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Location:
chromosome: 2
Exon count:
1
Sequence:
Chromosome: 2; NC_003071.7 (17860868..17861272, complement)

Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene Plant basic secretory protein (BSP) family protein Neighboring gene Phosphoribosyltransferase family protein Neighboring gene Pentatricopeptide repeat (PPR-like) superfamily protein Neighboring gene Putative AT-hook DNA-binding family protein Neighboring gene Magnesium transporter CorA-like family protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003071.7

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana. Lin X, et al. Nature, 1999 Dec 16. PMID 10617197

GeneRIFs: Gene References Into Functions

General gene information

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Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
  
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
  

General protein information

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Preferred Names
Carbohydrate-binding X8 domain superfamily protein
NP_181821.1
  • Carbohydrate-binding X8 domain superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: X8 (InterPro:IPR012946); BEST Arabidopsis thaliana protein match is: Carbohydrate-binding X8 domain superfamily protein (TAIR:AT2G30933.1); Has 1319 Blast hits to 1271 proteins in 29 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1319; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003071.7 Reference assembly

    Range
    17860868..17861272 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_129854.2 → NP_181821.1  Carbohydrate-binding X8 domain superfamily protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_181821.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178VWQ5, Q9SJG5
    Conserved Domains (1) summary
    smart00768
    Location:39 → 117
    X8; Possibly involved in carbohydrate binding
Nucleotide Protein
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