U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

PAS_chr1-3_0015 Hypothetical protein [ Komagataella phaffii GS115 ]

Gene ID: 8197949, updated on 23-Nov-2023

Summary

Go to the top of the page Help
Gene symbol
PAS_chr1-3_0015
Gene description
Hypothetical protein
Locus tag
PAS_chr1-3_0015
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Komagataella phaffii GS115 (strain: GS115)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Phaffomycetaceae; Komagataella
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See PAS_chr1-3_0015 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
1
Sequence:
Chromosome: 1; NC_012963.1 (27496..29475, complement)

Chromosome 1 - NC_012963.1Genomic Context describing neighboring genes Neighboring gene Hypothetical protein Neighboring gene Flavin-containing monooxygenase, localized to the cytoplasmic face of the ER membrane Neighboring gene Multifunctional enzyme of the peroxisomal fatty acid beta-oxidation pathway Neighboring gene uncharacterized protein

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_012963.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Genome sequence of the recombinant protein production host Pichia pastoris. De Schutter K, et al. Nat Biotechnol, 2009 Jun. PMID 19465926

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
Hypothetical protein

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_012963.1 Reference assembly

    Range
    27496..29475 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002489306.1 → XP_002489351.1  Hypothetical protein PAS_chr1-3_0015 [Komagataella phaffii GS115]

    See identical proteins and their annotated locations for XP_002489351.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    C4QUZ7, F2QLA4
    Conserved Domains (2) summary
    cd12148
    Location:141 → 582
    fungal_TF_MHR; fungal transcription factor regulatory middle homology region
    smart00066
    Location:21 → 59
    GAL4; GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases
Research Materials