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PAS_chr1-3_0027 uncharacterized protein [ Komagataella phaffii GS115 ]

Gene ID: 8197960, updated on 23-Nov-2023

Summary

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Gene symbol
PAS_chr1-3_0027
Gene description
uncharacterized protein
Locus tag
PAS_chr1-3_0027
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Komagataella phaffii GS115 (strain: GS115)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Phaffomycetaceae; Komagataella
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Genomic context

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See PAS_chr1-3_0027 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
1
Sequence:
Chromosome: 1; NC_012963.1 (50361..53057)

Chromosome 1 - NC_012963.1Genomic Context describing neighboring genes Neighboring gene Succinate semialdehyde dehydrogenase Neighboring gene Protein that stimulates strand exchange by stabilizing the binding of Rad51p to single-stranded DNA Neighboring gene Negative regulator of RNA polymerase III Neighboring gene Cytoplasmic inorganic pyrophosphatase (PPase) Neighboring gene Phosphoribosylanthranilate isomerase that catalyzes the third step in tryptophan biosynthesis

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_012963.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genome sequence of the recombinant protein production host Pichia pastoris. De Schutter K, et al. Nat Biotechnol, 2009 Jun. PMID 19465926
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calcium-activated cation channel activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
uncharacterized protein

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_012963.1 Reference assembly

    Range
    50361..53057
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002489318.1 → XP_002489363.1  uncharacterized protein PAS_chr1-3_0027 [Komagataella phaffii GS115]

    See identical proteins and their annotated locations for XP_002489363.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    C4QV09, F2QLB4
    Conserved Domains (2) summary
    pfam12621
    Location:807 → 889
    PHM7_ext; Extracellular tail, of 10TM putative phosphate transporter
    cl25971
    Location:8 → 688
    RSN1_7TM; Calcium-dependent channel, 7TM region, putative phosphate
Nucleotide Protein
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