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PAS_chr2-1_0668 Vacuolar membrane protein involved in vacuolar polyphosphate accumulation [ Komagataella phaffii GS115 ]

Gene ID: 8199281, updated on 23-Nov-2023

Summary

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Gene symbol
PAS_chr2-1_0668
Gene description
Vacuolar membrane protein involved in vacuolar polyphosphate accumulation
Locus tag
PAS_chr2-1_0668
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Komagataella phaffii GS115 (strain: GS115)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Phaffomycetaceae; Komagataella
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Genomic context

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See PAS_chr2-1_0668 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
1
Sequence:
Chromosome: 2; NC_012964.1 (1272221..1274638, complement)

Chromosome 2 - NC_012964.1Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene Protein involved in negative regulation of transcription of iron regulon Neighboring gene GTPase Neighboring gene Essential protein of the mitochondrial intermembrane space (IMS)

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_012964.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genome sequence of the recombinant protein production host Pichia pastoris. De Schutter K, et al. Nat Biotechnol, 2009 Jun. PMID 19465926
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
located_in fungal-type vacuole membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of vacuolar transporter chaperone complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
Vacuolar membrane protein involved in vacuolar polyphosphate accumulation

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_012964.1 Reference assembly

    Range
    1272221..1274638 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002491549.1 → XP_002491594.1  Vacuolar membrane protein involved in vacuolar polyphosphate accumulation [Komagataella phaffii GS115]

    See identical proteins and their annotated locations for XP_002491594.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    C4R1E0, F2QSC1
    Conserved Domains (3) summary
    cd07892
    Location:215 → 539
    PolyPPase_VTC2-3_like; Polyphosphate(polyP) polymerase domain of yeast vacuolar transport chaperone (VTC) proteins VTC-2, and -3 , and similar proteins
    COG5264
    Location:651 → 756
    VTC1; Vacuolar transporter chaperone [Posttranslational modification, protein turnover, chaperones]
    cd14480
    Location:2 → 141
    SPX_VTC2_like; SPX domain of the vacuolar transport chaperone Vtc2 and similar proteins
Nucleotide Protein
Heading Accession and Version

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