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PAS_chr2-1_0671 Hypothetical protein [ Komagataella phaffii GS115 ]

Gene ID: 8199284, updated on 23-Nov-2023

Summary

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Gene symbol
PAS_chr2-1_0671
Gene description
Hypothetical protein
Locus tag
PAS_chr2-1_0671
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Komagataella phaffii GS115 (strain: GS115)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Phaffomycetaceae; Komagataella
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Genomic context

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See PAS_chr2-1_0671 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
1
Sequence:
Chromosome: 2; NC_012964.1 (1276905..1278896, complement)

Chromosome 2 - NC_012964.1Genomic Context describing neighboring genes Neighboring gene GTPase Neighboring gene Essential protein of the mitochondrial intermembrane space (IMS) Neighboring gene Scaffold protein responsible for pre-autophagosomal structure organization Neighboring gene Mitochondrial threonyl-tRNA synthetase

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_012964.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genome sequence of the recombinant protein production host Pichia pastoris. De Schutter K, et al. Nat Biotechnol, 2009 Jun. PMID 19465926
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables nucleic acid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in spliceosomal complex disassembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of U2-type post-mRNA release spliceosomal complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
Hypothetical protein

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_012964.1 Reference assembly

    Range
    1276905..1278896 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002491552.1 → XP_002491597.1  Hypothetical protein PAS_chr2-1_0671 [Komagataella phaffii GS115]

    See identical proteins and their annotated locations for XP_002491597.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    C4R1E3, F2QSB9
    Conserved Domains (2) summary
    pfam01585
    Location:55 → 97
    G-patch; G-patch domain
    pfam07842
    Location:265 → 495
    GCFC; GC-rich sequence DNA-binding factor-like protein
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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