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PAS_chr2-1_0673 Mitochondrial threonyl-tRNA synthetase [ Komagataella phaffii GS115 ]

Gene ID: 8199286, updated on 23-Nov-2023

Summary

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Gene symbol
PAS_chr2-1_0673
Gene description
Mitochondrial threonyl-tRNA synthetase
Locus tag
PAS_chr2-1_0673
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Komagataella phaffii GS115 (strain: GS115)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Phaffomycetaceae; Komagataella
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Genomic context

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See PAS_chr2-1_0673 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
1
Sequence:
Chromosome: 2; NC_012964.1 (1280566..1281951, complement)

Chromosome 2 - NC_012964.1Genomic Context describing neighboring genes Neighboring gene Hypothetical protein Neighboring gene Scaffold protein responsible for pre-autophagosomal structure organization Neighboring gene Constituent of Paf1 complex with RNA polymerase II, Paf1p, Hpr1p, Ctr9, Leo1, Rtf1 and Ccr4p Neighboring gene Mitochondrial inner membrane protein with similarity to Mdm32p

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_012964.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genome sequence of the recombinant protein production host Pichia pastoris. De Schutter K, et al. Nat Biotechnol, 2009 Jun. PMID 19465926
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables threonine-tRNA ligase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in mitochondrial threonyl-tRNA aminoacylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
Mitochondrial threonyl-tRNA synthetase

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_012964.1 Reference assembly

    Range
    1280566..1281951 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002491554.1 → XP_002491599.1  Mitochondrial threonyl-tRNA synthetase [Komagataella phaffii GS115]

    See identical proteins and their annotated locations for XP_002491599.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    C4R1E5, F2QSB7
    Conserved Domains (1) summary
    cl28417
    Location:55 → 460
    ThrS; Threonyl-tRNA synthetase [Translation, ribosomal structure and biogenesis]
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Molecular Biology Databases
Research Materials