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PAS_chr2-1_0677 uncharacterized protein [ Komagataella phaffii GS115 ]

Gene ID: 8199290, updated on 23-Nov-2023

Summary

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Gene symbol
PAS_chr2-1_0677
Gene description
uncharacterized protein
Locus tag
PAS_chr2-1_0677
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Komagataella phaffii GS115 (strain: GS115)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Phaffomycetaceae; Komagataella
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Genomic context

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See PAS_chr2-1_0677 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
1
Sequence:
Chromosome: 2; NC_012964.1 (1288198..1291224)

Chromosome 2 - NC_012964.1Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene Hypothetical protein Neighboring gene Protein involved in the transcription of 35S rRNA genes by RNA polymerase I Neighboring gene Tryptophan synthase involved in tryptophan biosynthesis

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_012964.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genome sequence of the recombinant protein production host Pichia pastoris. De Schutter K, et al. Nat Biotechnol, 2009 Jun. PMID 19465926
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables small GTPase binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein import into nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nuclear envelope IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
uncharacterized protein

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_012964.1 Reference assembly

    Range
    1288198..1291224
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002491559.1 → XP_002491604.1  uncharacterized protein PAS_chr2-1_0677 [Komagataella phaffii GS115]

    See identical proteins and their annotated locations for XP_002491604.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    C4R1F0, F2QSB2
    Conserved Domains (1) summary
    cl27876
    Location:2 → 1005
    Cse1; Cse1
Nucleotide Protein
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