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Heavy metal transport/detoxification superfamily protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 819951, updated on 18-Sep-2024

Summary

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Official Full Name
Heavy metal transport/detoxification superfamily protein
Primary source
TAIR:AT3G07600
Locus tag
AT3G07600
See related
Araport:AT3G07600
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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Genomic context

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Location:
chromosome: 3
Exon count:
3
Sequence:
Chromosome: 3; NC_003074.8 (2424117..2425022, complement)

Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene Cytochrome b561/ferric reductase transmembrane with DOMON related domain-containing protein Neighboring gene uncharacterized protein Neighboring gene Small nuclear ribonucleoprotein family protein Neighboring gene ncRNA Neighboring gene Transcription factor jumonji (jmjC) domain-containing protein Neighboring gene glycosyltransferase

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003074.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713

GeneRIFs: Gene References Into Functions

General gene information

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Homology

NM_001337724.1
NM_111639.1

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Component Evidence Code Pubs
located_in nucleus ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
Heavy metal transport/detoxification superfamily protein
NP_187417.1
  • Heavy metal transport/detoxification superfamily protein; FUNCTIONS IN: metal ion binding; INVOLVED IN: metal ion transport; LOCATED IN: cellular_component unknown; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible, 4 anthesis; CONTAINS InterPro DOMAIN/s: Heavy metal transport/detoxification protein (InterPro:IPR006121); BEST Arabidopsis thaliana protein match is: Heavy metal transport/detoxification superfamily protein (TAIR:AT5G48290.1); Has 932 Blast hits to 701 proteins in 113 species: Archae - 0; Bacteria - 150; Metazoa - 39; Fungi - 24; Plants - 521; Viruses - 17; Other Eukaryotes - 181 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003074.8 Reference assembly

    Range
    2424117..2425022 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_111639.1 → NP_187417.1  Heavy metal transport/detoxification superfamily protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_187417.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q9SSF0, Q9ZRE6
    UniProtKB/TrEMBL
    A0A178VGY8, A0A5S9XA48

  2. NM_001337724.1 → NP_001326671.1  Heavy metal transport/detoxification superfamily protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178VGY8, A0A1I9LQ00
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q9SSF0.1

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