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PAS_chr3_1174 40S ribosomal protein S28 [ Komagataella phaffii GS115 ]

Gene ID: 8200110, updated on 23-Nov-2023

Summary

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Gene symbol
PAS_chr3_1174
Gene description
40S ribosomal protein S28
Locus tag
PAS_chr3_1174
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Komagataella phaffii GS115 (strain: GS115)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Phaffomycetaceae; Komagataella
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Genomic context

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See PAS_chr3_1174 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
1
Sequence:
Chromosome: 3; NC_012965.1 (555577..555780, complement)

Chromosome 3 - NC_012965.1Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene Polyphosphate phosphatase Neighboring gene uncharacterized protein Neighboring gene Putative amidase

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_012965.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genome sequence of the recombinant protein production host Pichia pastoris. De Schutter K, et al. Nat Biotechnol, 2009 Jun. PMID 19465926

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables structural constituent of ribosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in maturation of SSU-rRNA IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in ribosomal small subunit assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in translation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of cytosolic small ribosomal subunit IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in ribosome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
40S ribosomal protein S28

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_012965.1 Reference assembly

    Range
    555577..555780 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002492455.1 → XP_002492500.1  40S ribosomal protein S28 [Komagataella phaffii GS115]

    See identical proteins and their annotated locations for XP_002492500.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    C4QXU7, F2QLQ4
    Conserved Domains (1) summary
    cd04457
    Location:8 → 67
    S1_S28E; S1_S28E: S28E, S1-like RNA-binding domain. S1-like RNA-binding domains are found in a wide variety of RNA-associated proteins. S28E protein is a component of the 30S ribosomal subunit. S28E is highly conserved among archaea and eukaryotes. S28E may ...
Nucleotide Protein
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