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actin T1-like protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 820144, updated on 18-Sep-2024

Summary

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Official Full Name
actin T1-like protein
Primary source
TAIR:AT3G09860
Locus tag
AT3G09860
See related
Araport:AT3G09860
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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Genomic context

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Location:
chromosome: 3
Exon count:
3
Sequence:
Chromosome: 3; NC_003074.8 (3025993..3027250)

Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene cell division cycle 48 Neighboring gene D111/G-patch domain-containing protein Neighboring gene uncharacterized protein Neighboring gene SAUR-like auxin-responsive protein family

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003074.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Tic12, a 12-kDa essential component of the translocon at the inner envelope membrane of chloroplasts in Arabidopsis. Zhao X, et al. Plant Cell, 2022 Oct 27. PMID 35929083, Free PMC Article
  2. Arabidopsis G-protein interactome reveals connections to cell wall carbohydrates and morphogenesis. Klopffleisch K, et al. Mol Syst Biol, 2011 Sep 27. PMID 21952135, Free PMC Article
  3. Global Analysis of Membrane-associated Protein Oligomerization Using Protein Correlation Profiling. McBride Z, et al. Mol Cell Proteomics, 2017 Nov. PMID 28887381, Free PMC Article
  4. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713
  5. Multi-omics network-based functional annotation of unknown Arabidopsis genes. Depuydt T, et al. Plant J, 2021 Nov. PMID 34562334

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

NM_111821.4

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables chloroplast targeting sequence binding IDA
Inferred from Direct Assay
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein import into chloroplast stroma IDA
Inferred from Direct Assay
more info
 PubMed 
Component Evidence Code Pubs
part_of Tic complex IDA
Inferred from Direct Assay
more info
 PubMed 
located_in cytosol HDA PubMed 

General protein information

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Preferred Names
actin T1-like protein
NP_187597.2
  • unknown protein; Has 34 Blast hits to 34 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 34; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003074.8 Reference assembly

    Range
    3025993..3027250
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_111821.4 → NP_187597.2  actin T1-like protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_187597.2

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178VEM1, A0A384LLH7, Q6IDB3
Nucleotide Protein
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