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FYD FYD [ Arabidopsis thaliana (thale cress) ]

Gene ID: 820437, updated on 18-Sep-2024

Summary

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Official Symbol
FYD
Official Full Name
FYD
Primary source
TAIR:AT3G12570
Locus tag
AT3G12570
See related
Araport:AT3G12570
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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Genomic context

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See FYD in Genome Data Viewer
Location:
chromosome: 3
Exon count:
2
Sequence:
Chromosome: 3; NC_003074.8 (3988590..3991079)

Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein Neighboring gene XH/XS domain-containing protein Neighboring gene TRF-like 9 Neighboring gene heat shock protein 70 Neighboring gene Oligosaccaryltransferase Neighboring gene tRNA-Arg

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003074.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Proteomic study of the Arabidopsis thaliana chloroplastic envelope membrane utilizing alternatives to traditional two-dimensional electrophoresis. Froehlich JE, et al. J Proteome Res, 2003 Jul-Aug. PMID 12938931
  2. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713

GeneRIFs: Gene References Into Functions

General gene information

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NM_001035604.2
NM_112092.3
NM_180240.2
NM_202565.2

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Component Evidence Code Pubs
located_in chloroplast envelope HDA PubMed 

General protein information

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Preferred Names
FYD
NP_001030681.1
  • FYD; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: HSP20-like chaperones superfamily protein (TAIR:AT2G37570.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
NP_566427.1
  • FYD; LOCATED IN: chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: HSP20-like chaperones superfamily protein (TAIR:AT2G37570.1); Has 108 Blast hits to 106 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 108; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
NP_850571.1
  • FYD; LOCATED IN: chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: HSP20-like chaperones superfamily protein (TAIR:AT2G37570.1); Has 108 Blast hits to 106 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 108; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
NP_974294.1
  • FYD; BEST Arabidopsis thaliana protein match is: HSP20-like chaperones superfamily protein (TAIR:AT2G37570.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003074.8 Reference assembly

    Range
    3988590..3991079
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_180240.2 → NP_850571.1  FYD [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_850571.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    B9DH45, Q9LHA9
    Conserved Domains (1) summary
    cd06464
    Location:367 → 469
    ACD_sHsps-like; Alpha-crystallin domain (ACD) of alpha-crystallin-type small(s) heat shock proteins (Hsps). sHsps are small stress induced proteins with monomeric masses between 12 -43 kDa, whose common feature is the Alpha-crystallin domain (ACD). sHsps are generally ...

  2. NM_001035604.2 → NP_001030681.1  FYD [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_001030681.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    B9DH45, Q9LHA9
    Conserved Domains (1) summary
    cd06464
    Location:367 → 469
    ACD_sHsps-like; Alpha-crystallin domain (ACD) of alpha-crystallin-type small(s) heat shock proteins (Hsps). sHsps are small stress induced proteins with monomeric masses between 12 -43 kDa, whose common feature is the Alpha-crystallin domain (ACD). sHsps are generally ...

  3. NM_112092.3 → NP_566427.1  FYD [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_566427.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    B9DH45, Q9LHA9
    Conserved Domains (1) summary
    cd06464
    Location:367 → 469
    ACD_sHsps-like; Alpha-crystallin domain (ACD) of alpha-crystallin-type small(s) heat shock proteins (Hsps). sHsps are small stress induced proteins with monomeric masses between 12 -43 kDa, whose common feature is the Alpha-crystallin domain (ACD). sHsps are generally ...

  4. NM_202565.2 → NP_974294.1  FYD [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_974294.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    B9DH45, Q9LHA9
    Conserved Domains (1) summary
    cd06464
    Location:367 → 469
    ACD_sHsps-like; Alpha-crystallin domain (ACD) of alpha-crystallin-type small(s) heat shock proteins (Hsps). sHsps are small stress induced proteins with monomeric masses between 12 -43 kDa, whose common feature is the Alpha-crystallin domain (ACD). sHsps are generally ...
Nucleotide Protein
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