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SRF4 STRUBBELIG-receptor family 4 [ Arabidopsis thaliana (thale cress) ]

Gene ID: 820494, updated on 18-Sep-2024

Summary

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Official Symbol
SRF4
Official Full Name
STRUBBELIG-receptor family 4
Primary source
TAIR:AT3G13065
Locus tag
AT3G13065
See related
Araport:AT3G13065
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
MGH6.19; STRUBBELIG-receptor family 4
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Genomic context

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See SRF4 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
15
Sequence:
Chromosome: 3; NC_003074.8 (4187371..4191298)

Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene evolutionarily conserved C-terminal region 5 Neighboring gene ncRNA Neighboring gene Polyketide cyclase/dehydrase and lipid transport superfamily protein Neighboring gene CBS domain-containing protein / transporter associated domain-containing protein Neighboring gene uncharacterized protein Neighboring gene multidrug resistance-associated protein 3

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003074.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. An extracellular network of Arabidopsis leucine-rich repeat receptor kinases. Smakowska-Luzan E, et al. Nature, 2018 Jan 18. PMID 29320478, Free PMC Article
  2. Border control--a membrane-linked interactome of Arabidopsis. Jones AM, et al. Science, 2014 May 16. PMID 24833385
  3. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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NM_112145.4

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables kinase activity ISS
Inferred from Sequence or Structural Similarity
more info
  
enables protein kinase activity IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
acts_upstream_of_or_within phosphorylation ISS
Inferred from Sequence or Structural Similarity
more info
  
Component Evidence Code Pubs
located_in extracellular region ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
STRUBBELIG-receptor family 4
NP_566444.4
  • STRUBBELIG-receptor family 4 (SRF4); FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: STRUBBELIG-receptor family 5 (TAIR:AT1G78980.1); Has 161934 Blast hits to 117397 proteins in 3485 species: Archae - 127; Bacteria - 13410; Metazoa - 46563; Fungi - 8828; Plants - 74801; Viruses - 375; Other Eukaryotes - 17830 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003074.8 Reference assembly

    Range
    4187371..4191298
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_112145.4 → NP_566444.4  STRUBBELIG-receptor family 4 [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_566444.4

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q6R2K2, Q9LK66
    UniProtKB/TrEMBL
    A0A7G2EM29
    Conserved Domains (6) summary
    cd00116
    Location:79 → 235
    LRR_RI; Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond ...
    sd00033
    Location:97 → 118
    LRR_RI; leucine-rich repeat [structural motif]
    pfam00069
    Location:415 → 674
    Pkinase; Protein kinase domain
    pfam08263
    Location:28 → 68
    LRRNT_2; Leucine rich repeat N-terminal domain
    pfam13855
    Location:143 → 201
    LRR_8; Leucine rich repeat
    cl21453
    Location:421 → 686
    PKc_like; Protein Kinases, catalytic domain
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q6R2K2.1

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