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DIN4 Transketolase family protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 820547, updated on 18-Sep-2024

Summary

Official Symbol
DIN4
Official Full Name
Transketolase family protein
Primary source
TAIR:AT3G13450
Locus tag
AT3G13450
See related
Araport:AT3G13450
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
DARK INDUCIBLE 4
Summary
branched chain alpha-keto acid dehydrogenase E1 beta
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Genomic context

See DIN4 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
12
Sequence:
Chromosome: 3; NC_003074.8 (4382198..4384436, complement)

Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene S-adenosyl-L-methionine-dependent methyltransferases superfamily protein Neighboring gene pseudo Neighboring gene TATA binding protein 1 Neighboring gene evolutionarily conserved C-terminal region 2 Neighboring gene TCP-1/cpn60 chaperonin family protein Neighboring gene nuclear polyadenylated RNA-binding protein

Pathways from PubChem

General protein information

Preferred Names
Transketolase family protein
NP_187954.1
  • DARK INDUCIBLE 4 (DIN4); FUNCTIONS IN: 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) activity, catalytic activity; INVOLVED IN: response to light stimulus, response to sucrose stimulus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Transketolase, C-terminal (InterPro:IPR005476), Transketolase-like, C-terminal (InterPro:IPR015941), Transketolase, C-terminal/Pyruvate-ferredoxin oxidoreductase, domain II (InterPro:IPR009014), Transketolase-like, pyrimidine-binding domain (InterPro:IPR005475); BEST Arabidopsis thaliana protein match is: branched-chain alpha-keto acid decarboxylase E1 beta subunit (TAIR:AT1G55510.1); Has 16402 Blast hits to 16393 proteins in 2657 species: Archae - 210; Bacteria - 10668; Metazoa - 495; Fungi - 224; Plants - 385; Viruses - 0; Other Eukaryotes - 4420 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003074.8 Reference assembly

    Range
    4382198..4384436 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_112191.3NP_187954.1  Transketolase family protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_187954.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q9LDY2
    UniProtKB/TrEMBL
    A0A178VJU1, A0A5S9XC02, A0A654F6R1
    Conserved Domains (1) summary
    PTZ00182
    Location:23356
    PTZ00182; 3-methyl-2-oxobutanate dehydrogenase; Provisional