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Ribosomal protein L30/L7 family protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 820560, updated on 18-Sep-2024

Summary

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Official Full Name
Ribosomal protein L30/L7 family protein
Primary source
TAIR:AT3G13580
Locus tag
AT3G13580
See related
Araport:AT3G13580
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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Genomic context

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Location:
chromosome: 3
Exon count:
8
Sequence:
Chromosome: 3; NC_003074.8 (4433047..4435305)

Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene O-Glycosyl hydrolases family 17 protein Neighboring gene SC35-like splicing factor 30A Neighboring gene Cysteine/Histidine-rich C1 domain family protein Neighboring gene calmodulin-binding family protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003074.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Molecular evolutionary analyses of the Arabidopsis L7 ribosomal protein gene family. Barakat A, et al. Gene, 2007 Nov 15. PMID 17889453
  2. Identification of proteins that interact with catalytically active calcium-dependent protein kinases from Arabidopsis. Uno Y, et al. Mol Genet Genomics, 2009 Apr. PMID 19130088
  3. Proteomic characterization of evolutionarily conserved and variable proteins of Arabidopsis cytosolic ribosomes. Chang IF, et al. Plant Physiol, 2005 Mar. PMID 15734919, Free PMC Article
  4. High heterogeneity within the ribosomal proteins of the Arabidopsis thaliana 80S ribosome. Giavalisco P, et al. Plant Mol Biol, 2005 Mar. PMID 15821981
  5. Proteomic analysis of the 26S proteasome reveals its direct interaction with transit peptides of plastid protein precursors for their degradation. Sako K, et al. J Proteome Res, 2014 Jul 3. PMID 24846764

See all (13) citations in PubMed

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. The expression of RPL7D in Arabidopsis is reported.
    Title: Molecular evolutionary analyses of the Arabidopsis L7 ribosomal protein gene family.
Submit: New GeneRIF Correction

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

NM_001338057.1
NM_001338058.1
NM_001338059.1
NM_001338060.1
NM_001338061.1
NM_001338062.1
NM_112204.3
NM_202575.1
NM_202576.2

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables mRNA binding HDA PubMed 
enables mRNA binding IDA
Inferred from Direct Assay
more info
 PubMed 
Process Evidence Code Pubs
involved_in maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in cytoplasm ISM
Inferred from Sequence Model
more info
  
located_in cytosol HDA PubMed 
part_of cytosolic large ribosomal subunit HDA PubMed 
located_in cytosolic ribosome HDA PubMed 

General protein information

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Preferred Names
Ribosomal protein L30/L7 family protein
NP_187967.1
  • Ribosomal protein L30/L7 family protein; FUNCTIONS IN: structural constituent of ribosome, transcription regulator activity; INVOLVED IN: translation; LOCATED IN: cytosolic ribosome, cytosolic large ribosomal subunit, chloroplast, large ribosomal subunit, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L30, N-terminal (InterPro:IPR012988), Ribosomal protein L7, eukaryotic (InterPro:IPR005998), Ribosomal protein L30p/L7e, conserved region (InterPro:IPR000517), Ribosomal protein L30, conserved site (InterPro:IPR018038), Ribosomal protein L30, ferredoxin-like fold domain (InterPro:IPR016082); BEST Arabidopsis thaliana protein match is: Ribosomal protein L30/L7 family protein (TAIR:AT2G01250.1); Has 1325 Blast hits to 1323 proteins in 391 species: Archae - 211; Bacteria - 1; Metazoa - 476; Fungi - 215; Plants - 195; Viruses - 0; Other Eukaryotes - 227 (source: NCBI BLink).
NP_974304.1
  • Ribosomal protein L30/L7 family protein; FUNCTIONS IN: structural constituent of ribosome, transcription regulator activity; INVOLVED IN: translation; LOCATED IN: cytosolic ribosome, cytosolic large ribosomal subunit, large ribosomal subunit, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L30, N-terminal (InterPro:IPR012988), Ribosomal protein L7, eukaryotic (InterPro:IPR005998), Ribosomal protein L30p/L7e, conserved region (InterPro:IPR000517), Ribosomal protein L30, conserved site (InterPro:IPR018038), Ribosomal protein L30, ferredoxin-like fold domain (InterPro:IPR016082); BEST Arabidopsis thaliana protein match is: Ribosomal protein L30/L7 family protein (TAIR:AT2G01250.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
NP_974305.1
  • Ribosomal protein L30/L7 family protein; FUNCTIONS IN: structural constituent of ribosome, transcription regulator activity; INVOLVED IN: translation; LOCATED IN: cytosolic ribosome, cytosolic large ribosomal subunit, large ribosomal subunit, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L30, N-terminal (InterPro:IPR012988), Ribosomal protein L7, eukaryotic (InterPro:IPR005998), Ribosomal protein L30p/L7e, conserved region (InterPro:IPR000517), Ribosomal protein L30, conserved site (InterPro:IPR018038), Ribosomal protein L30, ferredoxin-like fold domain (InterPro:IPR016082); BEST Arabidopsis thaliana protein match is: Ribosomal protein L30/L7 family protein (TAIR:AT2G01250.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003074.8 Reference assembly

    Range
    4433047..4435305
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_112204.3 → NP_187967.1  Ribosomal protein L30/L7 family protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_187967.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q9LHP1
    UniProtKB/TrEMBL
    A0A178VHA2, A0A5S9XBS9
    Conserved Domains (1) summary
    TIGR01310
    Location:12 → 244
    uL30_euk; 60S ribosomal protein uL30, eukaryotic form

  2. NM_202575.1 → NP_974304.1  Ribosomal protein L30/L7 family protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_974304.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q9LHP1
    UniProtKB/TrEMBL
    A0A178VHA2, A0A5S9XBS9
    Conserved Domains (1) summary
    TIGR01310
    Location:12 → 244
    uL30_euk; 60S ribosomal protein uL30, eukaryotic form

  3. NM_202576.2 → NP_974305.1  Ribosomal protein L30/L7 family protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_974305.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q9LHP1
    UniProtKB/TrEMBL
    A0A178VHA2, A0A5S9XBS9
    Conserved Domains (1) summary
    TIGR01310
    Location:12 → 244
    uL30_euk; 60S ribosomal protein uL30, eukaryotic form

  4. NM_001338059.1 → NP_001326489.1  Ribosomal protein L30/L7 family protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q9LHP1
    UniProtKB/TrEMBL
    A0A178VHA2, A0A5S9XBS9
    Conserved Domains (1) summary
    TIGR01310
    Location:12 → 244
    uL30_euk; 60S ribosomal protein uL30, eukaryotic form

  5. NM_001338057.1 → NP_001326491.1  Ribosomal protein L30/L7 family protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q9LHP1
    UniProtKB/TrEMBL
    A0A178VHA2, A0A5S9XBS9
    Conserved Domains (1) summary
    TIGR01310
    Location:12 → 244
    uL30_euk; 60S ribosomal protein uL30, eukaryotic form

  6. NM_001338060.1 → NP_001326488.1  Ribosomal protein L30/L7 family protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q9LHP1
    UniProtKB/TrEMBL
    A0A178VHA2, A0A5S9XBS9
    Conserved Domains (1) summary
    TIGR01310
    Location:12 → 244
    uL30_euk; 60S ribosomal protein uL30, eukaryotic form

  7. NM_001338061.1 → NP_001326487.1  Ribosomal protein L30/L7 family protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q9LHP1
    UniProtKB/TrEMBL
    A0A178VHA2, A0A5S9XBS9
    Conserved Domains (1) summary
    TIGR01310
    Location:12 → 244
    uL30_euk; 60S ribosomal protein uL30, eukaryotic form

  8. NM_001338062.1 → NP_001326486.1  Ribosomal protein L30/L7 family protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q9LHP1
    UniProtKB/TrEMBL
    A0A178VHA2, A0A5S9XBS9
    Conserved Domains (1) summary
    TIGR01310
    Location:12 → 244
    uL30_euk; 60S ribosomal protein uL30, eukaryotic form

  9. NM_001338058.1 → NP_001326490.1  Ribosomal protein L30/L7 family protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q9LHP1
    UniProtKB/TrEMBL
    A0A178VHA2, A0A5S9XBS9
    Conserved Domains (1) summary
    TIGR01310
    Location:12 → 244
    uL30_euk; 60S ribosomal protein uL30, eukaryotic form
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q9LHP1.1

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