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ZYRO0G22550g uncharacterized protein [ Zygosaccharomyces rouxii ]

Gene ID: 8206796, updated on 21-Dec-2023

Summary

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Gene symbol
ZYRO0G22550g
Gene description
uncharacterized protein
Locus tag
ZYRO0G22550g
Gene type
protein coding
RNA name
uncharacterized protein
RefSeq status
PROVISIONAL
Organism
Zygosaccharomyces rouxii (strain: CBS 732)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Zygosaccharomyces
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Genomic context

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See ZYRO0G22550g in Genome Data Viewer
Location:
chromosome: G
Exon count:
1
Sequence:
Chromosome: G; NC_012996.1 (1856064..1858238, complement)

Chromosome G - NC_012996.1Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_012996.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Comparative genomics of protoploid Saccharomycetaceae. Génolevures Consortium, et al. Genome Res, 2009 Oct. PMID 19525356, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of transcription from RNA polymerase II promoter by galactose IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Names
uncharacterized protein
XP_002498956.1
  • weakly similar to uniprot|P39961 Saccharomyces cerevisiae YER184C Hypothetical ORF

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_012996.1 Reference assembly

    Range
    1856064..1858238 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002498911.1 → XP_002498956.1  uncharacterized protein ZYRO0G22550g [Zygosaccharomyces rouxii]

    See identical proteins and their annotated locations for XP_002498956.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A1Q3A7J9, C5E1N9
    Conserved Domains (2) summary
    cd00067
    Location:8 → 42
    GAL4; GAL4-like Zn2Cys6 binuclear cluster DNA-binding domain; found in transcription regulators like GAL4. Domain consists of two helices organized around a Zn(2)Cys(6 )motif; Binds to sequences containing 2 DNA half sites comprised of 3-5 C/G combinations
    pfam04082
    Location:317 → 427
    Fungal_trans; Fungal specific transcription factor domain
Nucleotide Protein
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