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ZYRO0G03982g uncharacterized protein [ Zygosaccharomyces rouxii ]

Gene ID: 8206799, updated on 21-Dec-2023

Summary

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Gene symbol
ZYRO0G03982g
Gene description
uncharacterized protein
Locus tag
ZYRO0G03982g
Gene type
protein coding
RNA name
uncharacterized protein
RefSeq status
PROVISIONAL
Organism
Zygosaccharomyces rouxii (strain: CBS 732)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Zygosaccharomyces
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Genomic context

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See ZYRO0G03982g in Genome Data Viewer
Location:
chromosome: G
Exon count:
1
Sequence:
Chromosome: G; NC_012996.1 (322285..327141)

Chromosome G - NC_012996.1Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene ncRNA Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_012996.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Comparative genomics of protoploid Saccharomycetaceae. Génolevures Consortium, et al. Genome Res, 2009 Oct. PMID 19525356, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in actin cortical patch assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in endocytosis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in endosomal transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in actin cortical patch IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in mating projection tip IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Names
uncharacterized protein
XP_002498172.1
  • some similarities with uniprot|P32521 YIR006C Saccharomyces cerevisiae PAN1 Part of actin cytoskeleton-regulatory complex Pan1p-Sla1p-End3p

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_012996.1 Reference assembly

    Range
    322285..327141
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002498127.1 → XP_002498172.1  uncharacterized protein ZYRO0G03982g [Zygosaccharomyces rouxii]

    See identical proteins and their annotated locations for XP_002498172.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A1Q3A505, C5DZF5
    Conserved Domains (3) summary
    smart00027
    Location:757 → 849
    EH; Eps15 homology domain
    pfam09606
    Location:333 → 632
    Med15; ARC105 or Med15 subunit of Mediator complex non-fungal
    cl27702
    Location:1149 → 1285
    COG3942; Surface antigen [Cell wall/membrane/envelope biogenesis]
Nucleotide Protein
Heading Accession and Version

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