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Peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine amidase A protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 820721, updated on 18-Sep-2024

Summary

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Official Full Name
Peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine amidase A protein
Primary source
TAIR:AT3G14920
Locus tag
AT3G14920
See related
Araport:AT3G14920
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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Genomic context

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Location:
chromosome: 3
Exon count:
1
Sequence:
Chromosome: 3; NC_003074.8 (5017941..5020476)

Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene Rab3 GTPase-activating protein non-catalytic subunit Neighboring gene Uroporphyrinogen decarboxylase Neighboring gene phosphoenolpyruvate carboxylase 3 Neighboring gene tetratricopetide-repeat thioredoxin-like 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003074.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The vegetative vacuole proteome of Arabidopsis thaliana reveals predicted and unexpected proteins. Carter C, et al. Plant Cell, 2004 Dec. PMID 15539469, Free PMC Article
  2. A proteomics dissection of Arabidopsis thaliana vacuoles isolated from cell culture. Jaquinod M, et al. Mol Cell Proteomics, 2007 Mar. PMID 17151019, Free PMC Article
  3. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713

GeneRIFs: Gene References Into Functions

General gene information

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Homology

NM_112354.3

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Component Evidence Code Pubs
located_in chloroplast ISM
Inferred from Sequence Model
more info
  
located_in plant-type vacuole HDA PubMed 

General protein information

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Preferred Names
Peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine amidase A protein
NP_188110.1
  • Peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine amidase A protein; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane, vacuole, plant-type cell wall; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine amidase A (InterPro:IPR021102); BEST Arabidopsis thaliana protein match is: Peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine amidase A protein (TAIR:AT5G05480.1); Has 261 Blast hits to 247 proteins in 94 species: Archae - 30; Bacteria - 27; Metazoa - 0; Fungi - 111; Plants - 90; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003074.8 Reference assembly

    Range
    5017941..5020476
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_112354.3 → NP_188110.1  Peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine amidase A protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_188110.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178VD54, A0A654FH52, Q9LKB2
    Conserved Domains (1) summary
    pfam12222
    Location:63 → 486
    PNGaseA; Peptide N-acetyl-beta-D-glucosaminyl asparaginase amidase A
Nucleotide Protein
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