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Leucine-rich repeat protein kinase family protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 821164, updated on 18-Sep-2024

Summary

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Official Full Name
Leucine-rich repeat protein kinase family protein
Primary source
TAIR:AT3G03770
Locus tag
AT3G03770
See related
Araport:AT3G03770
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
F20H23.20; F20H23_20
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Genomic context

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Location:
chromosome: 3
Exon count:
10
Sequence:
Chromosome: 3; NC_003074.8 (945077..949238, complement)

Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene BTB-POZ and MATH domain 4 Neighboring gene SET domain protein 20 Neighboring gene LOB domain-containing protein 20 Neighboring gene HSP20-like chaperones superfamily protein Neighboring gene hydroxyproline-rich glycoprotein family protein Neighboring gene methionine synthase 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003074.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A membrane protein/signaling protein interaction network for Arabidopsis version AMPv2. Lalonde S, et al. Front Physiol, 2010. PMID 21423366, Free PMC Article
  2. An extracellular network of Arabidopsis leucine-rich repeat receptor kinases. Smakowska-Luzan E, et al. Nature, 2018 Jan 18. PMID 29320478, Free PMC Article
  3. Border control--a membrane-linked interactome of Arabidopsis. Jones AM, et al. Science, 2014 May 16. PMID 24833385
  4. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

NM_001202872.1
NM_001337482.1

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
  
enables protein binding IPI
Inferred from Physical Interaction
more info
 PubMed 
enables protein kinase activity IEA
Inferred from Electronic Annotation
more info
  
enables protein kinase activity ISS
Inferred from Sequence or Structural Similarity
more info
  

General protein information

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Preferred Names
Leucine-rich repeat protein kinase family protein
NP_001189801.1
  • Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT5G14210.1).
NP_566213.1
  • Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT5G14210.1); Has 99971 Blast hits to 58260 proteins in 1687 species: Archae - 62; Bacteria - 4595; Metazoa - 21933; Fungi - 2176; Plants - 63736; Viruses - 96; Other Eukaryotes - 7373 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003074.8 Reference assembly

    Range
    945077..949238 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_111248.5 → NP_566213.1  Leucine-rich repeat protein kinase family protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_566213.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    B0FUP8, Q8GUM9, Q8LFN2, Q9SRV4
    UniProtKB/TrEMBL
    A0A178V9M7, A0A5S9X965, A0A654FEC0
    Conserved Domains (3) summary
    PLN00113
    Location:77 → 753
    PLN00113; leucine-rich repeat receptor-like protein kinase; Provisional
    sd00033
    Location:131 → 154
    LRR_RI; leucine-rich repeat [structural motif]
    cl21453
    Location:483 → 745
    PKc_like; Protein Kinases, catalytic domain

  2. NM_001202872.1 → NP_001189801.1  Leucine-rich repeat protein kinase family protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_001189801.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    B0FUP8, Q8GUM9, Q8LFN2, Q9SRV4
    UniProtKB/TrEMBL
    A0A178V9M7, A0A5S9X965, A0A654FEC0
    Conserved Domains (3) summary
    PLN00113
    Location:77 → 753
    PLN00113; leucine-rich repeat receptor-like protein kinase; Provisional
    sd00033
    Location:131 → 154
    LRR_RI; leucine-rich repeat [structural motif]
    cl21453
    Location:483 → 745
    PKc_like; Protein Kinases, catalytic domain

  3. NM_001337482.1 → NP_001326355.1  Leucine-rich repeat protein kinase family protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    B0FUP8, Q8GUM9, Q8LFN2, Q9SRV4
    UniProtKB/TrEMBL
    A0A178V9M7, A0A5S9X965, A0A654FEC0
    Conserved Domains (3) summary
    PLN00113
    Location:77 → 753
    PLN00113; leucine-rich repeat receptor-like protein kinase; Provisional
    sd00033
    Location:131 → 154
    LRR_RI; leucine-rich repeat [structural motif]
    cl21453
    Location:483 → 745
    PKc_like; Protein Kinases, catalytic domain
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q8LFN2.1

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