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UNE6 LUC7 related protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 821276, updated on 18-Sep-2024

Summary

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Official Symbol
UNE6
Official Full Name
LUC7 related protein
Primary source
TAIR:AT3G03340
Locus tag
AT3G03340
See related
Araport:AT3G03340
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
T21P5.24; T21P5_24; unfertilized embryo sac 6
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Genomic context

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See UNE6 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
13
Sequence:
Chromosome: 3; NC_003074.8 (786205..790152)

Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene lecithin:cholesterol acyltransferase 3 Neighboring gene RNA-binding ASCH domain protein Neighboring gene NAD(P)-binding Rossmann-fold superfamily protein Neighboring gene cold-regulated protein Neighboring gene NAD(P)-binding Rossmann-fold superfamily protein Neighboring gene F-box/RNI-like superfamily protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003074.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genetic and molecular identification of genes required for female gametophyte development and function in Arabidopsis. Pagnussat GC, et al. Development, 2005 Feb. PMID 15634699
  2. Identification and characterization of nuclear pore complex components in Arabidopsis thaliana. Tamura K, et al. Plant Cell, 2010 Dec. PMID 21189294, Free PMC Article
  3. Advanced proteomic analyses yield a deep catalog of ubiquitylation targets in Arabidopsis. Kim DY, et al. Plant Cell, 2013 May. PMID 23667124, Free PMC Article
  4. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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NM_001337466.1
NM_111205.4

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables mRNA binding IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
acts_upstream_of_or_within double fertilization forming a zygote and endosperm IMP
Inferred from Mutant Phenotype
more info
 PubMed 
involved_in mRNA splice site recognition IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
part_of U1 snRNP IEA
Inferred from Electronic Annotation
more info
  
located_in nucleus ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
LUC7 related protein
NP_566203.2
  • unfertilized embryo sac 6 (UNE6); CONTAINS InterPro DOMAIN/s: LUC7 related (InterPro:IPR004882); BEST Arabidopsis thaliana protein match is: LUC7 related protein (TAIR:AT5G17440.1); Has 25128 Blast hits to 10547 proteins in 429 species: Archae - 23; Bacteria - 333; Metazoa - 14905; Fungi - 3154; Plants - 2060; Viruses - 86; Other Eukaryotes - 4567 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003074.8 Reference assembly

    Range
    786205..790152
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001337465.1 → NP_001327217.1  LUC7 related protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A1I9LRM4

  2. NM_111205.4 → NP_566203.2  LUC7 related protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_566203.2

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178VG98, A0A384LKH8, F4IZU3
    Conserved Domains (1) summary
    cl27291
    Location:2 → 326
    LUC7; LUC7 N_terminus

  3. NM_001337466.1 → NP_001327218.1  LUC7 related protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A1I9LRM5, A0A7G2EIU6
Nucleotide Protein
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