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TATA box-binding protein associated factor RNA polymerase I subunit C [ Arabidopsis thaliana (thale cress) ]

Gene ID: 821360, updated on 18-Sep-2024

Summary

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Official Full Name
TATA box-binding protein associated factor RNA polymerase I subunit C
Primary source
TAIR:AT3G18310
Locus tag
AT3G18310
See related
Araport:AT3G18310
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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Genomic context

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Location:
chromosome: 3
Exon count:
1
Sequence:
Chromosome: 3; NC_003074.8 (6284356..6287225, complement)

Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene DUF1639 family protein, putative (DUF1639) Neighboring gene uncharacterized protein Neighboring gene F-box and associated interaction domains-containing protein Neighboring gene F-box family protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003074.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713
  2. Multi-omics network-based functional annotation of unknown Arabidopsis genes. Depuydt T, et al. Plant J, 2021 Nov. PMID 34562334

GeneRIFs: Gene References Into Functions

General gene information

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NM_112716.3

Gene Ontology Provided by TAIR

Process Evidence Code Pubs
involved_in transcription by RNA polymerase I IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in nucleus ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
TATA box-binding protein associated factor RNA polymerase I subunit C
NP_188460.1
  • unknown protein; Has 30 Blast hits to 30 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 30; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003074.8 Reference assembly

    Range
    6284356..6287225 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_112716.3 → NP_188460.1  TATA box-binding protein associated factor RNA polymerase I subunit C [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_188460.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178V9C1, A0A384LM95, A0A654F9E7, Q9LS59
Nucleotide Protein
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