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IPT7 isopentenyltransferase 7 [ Arabidopsis thaliana (thale cress) ]

Gene ID: 821943, updated on 18-Sep-2024

Summary

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Official Symbol
IPT7
Official Full Name
isopentenyltransferase 7
Primary source
TAIR:AT3G23630
Locus tag
AT3G23630
See related
Araport:AT3G23630
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
ARABIDOPSIS THALIANA ISOPENTENYLTRANSFERASE 7; ATIPT7; isopentenyltransferase 7
Summary
Encodes an isopentenyl transferase involved in cytokinin biosynthesis.
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Genomic context

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See IPT7 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
1
Sequence:
Chromosome: 3; NC_003074.8 (8488695..8490266)

Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene dual specificity protein phosphatase 1 Neighboring gene Ribosomal RNA processing Brix domain protein Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene F-box associated ubiquitination effector family protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003074.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A PHABULOSA/cytokinin feedback loop controls root growth in Arabidopsis. Dello Ioio R, et al. Curr Biol, 2012 Sep 25. PMID 22902752
  2. Arabidopsis KNOXI proteins activate cytokinin biosynthesis. Yanai O, et al. Curr Biol, 2005 Sep 6. PMID 16139212
  3. Agrobacterium tumefaciens increases cytokinin production in plastids by modifying the biosynthetic pathway in the host plant. Sakakibara H, et al. Proc Natl Acad Sci U S A, 2005 Jul 12. PMID 15998742, Free PMC Article
  4. Distinct isoprenoid origins of cis- and trans-zeatin biosyntheses in Arabidopsis. Kasahara H, et al. J Biol Chem, 2004 Apr 2. PMID 14726522
  5. Roles of Arabidopsis ATP/ADP isopentenyltransferases and tRNA isopentenyltransferases in cytokinin biosynthesis. Miyawaki K, et al. Proc Natl Acad Sci U S A, 2006 Oct 31. PMID 17062755, Free PMC Article

See all (7) citations in PubMed

GeneRIFs: Gene References Into Functions

Pathways from PubChem

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General gene information

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Homology

NM_113267.3

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables AMP dimethylallyltransferase activity IMP
Inferred from Mutant Phenotype
more info
 PubMed 
enables ATP/ADP dimethylallyltransferase activity ISS
Inferred from Sequence or Structural Similarity
more info
 PubMed 
Process Evidence Code Pubs
acts_upstream_of_or_within cytokinin biosynthetic process IGI
Inferred from Genetic Interaction
more info
 PubMed 
acts_upstream_of_or_within cytokinin biosynthetic process TAS
Traceable Author Statement
more info
 PubMed 
acts_upstream_of_or_within pollen tube growth IEP
Inferred from Expression Pattern
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrion IDA
Inferred from Direct Assay
more info
 PubMed 

General protein information

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Preferred Names
isopentenyltransferase 7
NP_566735.1
  • isopentenyltransferase 7 (IPT7); CONTAINS InterPro DOMAIN/s: tRNA isopentenyltransferase (InterPro:IPR002627); BEST Arabidopsis thaliana protein match is: isopentenyltransferase 5 (TAIR:AT5G19040.1); Has 8574 Blast hits to 7864 proteins in 2586 species: Archae - 0; Bacteria - 5836; Metazoa - 176; Fungi - 188; Plants - 290; Viruses - 0; Other Eukaryotes - 2084 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003074.8 Reference assembly

    Range
    8488695..8490266
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_113267.3 → NP_566735.1  isopentenyltransferase 7 [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_566735.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q8LA74, Q94ID1, Q9LUG4
    UniProtKB/TrEMBL
    A0A178V807, A0A5S9XFD1
    Conserved Domains (1) summary
    cl38936
    Location:31 → 297
    P-loop_NTPase; P-loop containing Nucleoside Triphosphate Hydrolases
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q94ID1.2

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