U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

VAMP728 vesicle-associated membrane protein 728 [ Arabidopsis thaliana (thale cress) ]

Gene ID: 822087, updated on 18-Sep-2024

Summary

Go to the top of the page Help
Official Symbol
VAMP728
Official Full Name
vesicle-associated membrane protein 728
Primary source
TAIR:AT3G24890
Locus tag
AT3G24890
See related
Araport:AT3G24890
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
ATVAMP728; vesicle-associated membrane protein 728
Summary
member of VAMP72 Gene Family
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See VAMP728 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
5
Sequence:
Chromosome: 3; NC_003074.8 (9097391..9099073)

Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene Helicase/SANT-associated, DNA binding protein Neighboring gene ncRNA Neighboring gene Helicase/SANT-associated, DNA binding protein Neighboring gene receptor like protein 39 Neighboring gene ncRNA Neighboring gene miscRNA

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_003074.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help
NM_001203037.1
NM_001338720.1
NM_001338721.1
NM_001338722.1
NM_113401.5

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
  
Component Evidence Code Pubs
located_in mitochondrion ISM
Inferred from Sequence Model
more info
  

General protein information

Go to the top of the page Help
Preferred Names
vesicle-associated membrane protein 728
NP_001189966.1
  • vesicle-associated membrane protein 728 (VAMP728); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: vesicle-mediated transport; LOCATED IN: integral to membrane, membrane; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Synaptobrevin (InterPro:IPR001388); BEST Arabidopsis thaliana protein match is: vesicle-associated membrane protein 726 (TAIR:AT1G04760.1).
NP_189133.4
  • vesicle-associated membrane protein 728 (VAMP728); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: vesicle-mediated transport; LOCATED IN: integral to membrane, membrane; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Synaptobrevin (InterPro:IPR001388); BEST Arabidopsis thaliana protein match is: vesicle-associated membrane protein 726 (TAIR:AT1G04760.1); Has 286 Blast hits to 285 proteins in 34 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 279; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003074.8 Reference assembly

    Range
    9097391..9099073
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_113401.5 → NP_189133.4  vesicle-associated membrane protein 728 [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_189133.4

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q6AWV9
    Conserved Domains (1) summary
    cd15843
    Location:31 → 65
    R-SNARE; SNARE motif, subgroup R-SNARE

  2. NM_001338720.1 → NP_001326706.1  vesicle-associated membrane protein 728 [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q6AWV9

  3. NM_001338721.1 → NP_001326704.1  vesicle-associated membrane protein 728 [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q6AWV9

  4. NM_001203037.1 → NP_001189966.1  vesicle-associated membrane protein 728 [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_001189966.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    F4J7T4
    Conserved Domains (2) summary
    pfam00957
    Location:28 → 107
    Synaptobrevin; Synaptobrevin
    cl22856
    Location:30 → 100
    SNARE; SNARE motif

  5. NM_001338722.1 → NP_001326705.1  vesicle-associated membrane protein 728 [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q6AWV9
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.