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Terpenoid cyclases/Protein prenyltransferases superfamily protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 822173, updated on 18-Sep-2024

Summary

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Official Full Name
Terpenoid cyclases/Protein prenyltransferases superfamily protein
Primary source
TAIR:AT3G25810
Locus tag
AT3G25810
See related
Araport:AT3G25810
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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Genomic context

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Location:
chromosome: 3
Exon count:
7
Sequence:
Chromosome: 3; NC_003074.8 (9430762..9434000)

Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene protein phosphatase 2A subunit A2 Neighboring gene uncharacterized protein Neighboring gene pseudo Neighboring gene terpene synthase-like sequence-1,8-cineole

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003074.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Biosynthesis and emission of terpenoid volatiles from Arabidopsis flowers. Chen F, et al. Plant Cell, 2003 Feb. PMID 12566586, Free PMC Article
  2. Proteomic profiling of tandem affinity purified 14-3-3 protein complexes in Arabidopsis thaliana. Chang IF, et al. Proteomics, 2009 Jun. PMID 19452453, Free PMC Article
  3. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713

GeneRIFs: Gene References Into Functions

Pathways from PubChem

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Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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NM_113482.5

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables (4S)-limonene synthase activity IDA
Inferred from Direct Assay
more info
 PubMed 
enables (E)-beta-ocimene synthase activity IDA
Inferred from Direct Assay
more info
 PubMed 
enables (R)-limonene synthase activity IDA
Inferred from Direct Assay
more info
 PubMed 
enables magnesium ion binding IEA
Inferred from Electronic Annotation
more info
  
enables myrcene synthase activity IDA
Inferred from Direct Assay
more info
 PubMed 
enables pinene synthase activity IDA
Inferred from Direct Assay
more info
 PubMed 
enables protein binding IPI
Inferred from Physical Interaction
more info
 PubMed 
enables sabinene synthase activity IDA
Inferred from Direct Assay
more info
 PubMed 
enables sesquiterpene synthase activity IDA
Inferred from Direct Assay
more info
 PubMed 
Process Evidence Code Pubs
involved_in diterpenoid biosynthetic process IEA
Inferred from Electronic Annotation
more info
  
acts_upstream_of_or_within monoterpene biosynthetic process IDA
Inferred from Direct Assay
more info
 PubMed 
Component Evidence Code Pubs
located_in chloroplast ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
Terpenoid cyclases/Protein prenyltransferases superfamily protein
NP_189209.2
  • Terpenoid cyclases/Protein prenyltransferases superfamily protein; CONTAINS InterPro DOMAIN/s: Terpene synthase, metal-binding domain (InterPro:IPR005630), Terpenoid synthase (InterPro:IPR008949), Terpenoid cylases/protein prenyltransferase alpha-alpha toroid (InterPro:IPR008930), Terpene synthase-like (InterPro:IPR001906); BEST Arabidopsis thaliana protein match is: terpene synthase-like sequence-1,8-cineole (TAIR:AT3G25820.1); Has 1745 Blast hits to 1713 proteins in 179 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1740; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003074.8 Reference assembly

    Range
    9430762..9434000
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_113482.5 → NP_189209.2  Terpenoid cyclases/Protein prenyltransferases superfamily protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_189209.2

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    B7ZWS1, Q84UV1, Q9LRZ6
    UniProtKB/TrEMBL
    A0A178VMB9, A0A5S9XFM4
    Conserved Domains (1) summary
    cd00684
    Location:47 → 594
    Terpene_cyclase_plant_C1; Plant Terpene Cyclases, Class 1
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q9LRZ6.1

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