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ATB' DELTA serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B prime delta [ Arabidopsis thaliana (thale cress) ]

Gene ID: 822200, updated on 18-Sep-2024

Summary

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Official Symbol
ATB' DELTA
Official Full Name
serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B prime delta
Primary source
TAIR:AT3G26030
Locus tag
AT3G26030
See related
Araport:AT3G26030
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
MPE11.23; serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B prime delta
Summary
protein phosphatase 2A regulatory subunit isoform B' delta
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Genomic context

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See ATB' DELTA in Genome Data Viewer
Location:
chromosome: 3
Exon count:
2
Sequence:
Chromosome: 3; NC_003074.8 (9516953..9519563)

Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene Galactose oxidase/kelch repeat superfamily protein Neighboring gene Protein phosphatase 2A regulatory B subunit family protein Neighboring gene HXXXD-type acyl-transferase family protein Neighboring gene TPX2 (targeting protein for Xklp2) protein family

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003074.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Identification of Open Stomata1-Interacting Proteins Reveals Interactions with Sucrose Non-fermenting1-Related Protein Kinases2 and with Type 2A Protein Phosphatases That Function in Abscisic Acid Responses. Waadt R, et al. Plant Physiol, 2015 Sep. PMID 26175513, Free PMC Article
  2. High-throughput protein localization in Arabidopsis using Agrobacterium-mediated transient expression of GFP-ORF fusions. Koroleva OA, et al. Plant J, 2005 Jan. PMID 15610358
  3. Evidence for network evolution in an Arabidopsis interactome map. Arabidopsis Interactome Mapping Consortium. Science, 2011 Jul 29. PMID 21798944, Free PMC Article
  4. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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NM_113507.3

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables protein binding IPI
Inferred from Physical Interaction
more info
 PubMed 
enables protein phosphatase regulator activity IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
involved_in signal transduction IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in cytoplasm HDA PubMed 
located_in nucleolus HDA PubMed 
located_in nucleus ISM
Inferred from Sequence Model
more info
  
part_of protein phosphatase type 2A complex IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B prime delta
NP_189232.1
  • serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B prime delta (ATB' DELTA); FUNCTIONS IN: protein phosphatase type 2A regulator activity; INVOLVED IN: signal transduction; LOCATED IN: nucleolus, protein phosphatase type 2A complex, cytoplasm; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein phosphatase 2A, regulatory B subunit, B56 (InterPro:IPR002554); BEST Arabidopsis thaliana protein match is: Protein phosphatase 2A regulatory B subunit family protein (TAIR:AT3G26020.2); Has 1183 Blast hits to 1155 proteins in 195 species: Archae - 0; Bacteria - 0; Metazoa - 568; Fungi - 166; Plants - 302; Viruses - 0; Other Eukaryotes - 147 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003074.8 Reference assembly

    Range
    9516953..9519563
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_113507.3 → NP_189232.1  serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B prime delta [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_189232.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q9ZQY6
    UniProtKB/TrEMBL
    A0A178VDE2, A0A5S9XFV4, A0A654FHX1
    Conserved Domains (2) summary
    pfam01603
    Location:67 → 471
    B56; Protein phosphatase 2A regulatory B subunit (B56 family)
    cl27532
    Location:13 → 91
    B56; Protein phosphatase 2A regulatory B subunit (B56 family)
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q9ZQY6.1

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